Detailed information NTG1136675

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQL07_RS01390
• Genome accession: NZ_LS483327
• Coordinates: 252857..253774 (+)
• Length: 305 a.a.
• NCBI ID: WP_111702797.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC12069
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 247857..258774

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL07_RS01375 (NCTC12069_00272)	amiC	249357..250859 (+)	1503	WP_002992227.1	ABC transporter permease	Regulator
DQL07_RS01380 (NCTC12069_00273)	amiD	250859..251785 (+)	927	WP_002986004.1	oligopeptide ABC transporter permease OppC	Regulator
DQL07_RS01385 (NCTC12069_00274)	amiE	251794..252864 (+)	1071	WP_002992231.1	ABC transporter ATP-binding protein	Regulator
DQL07_RS01390 (NCTC12069_00275)	amiF	252857..253774 (+)	918	WP_111702797.1	ATP-binding cassette domain-containing protein	Regulator
DQL07_RS09720	-	253812..253901 (-)	90	WP_109821088.1	IS3 family transposase	-
DQL07_RS09440	-	253922..254101 (-)	180	WP_014635282.1	hypothetical protein	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 34431.58 Da
• Isoelectric Point: 6.3168

>NTDB_id=1136675 DQL07_RS01390 WP_111702797.1 252857..253774(+) (amiF) [Streptococcus pyogenes strain NCTC12069]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRIGIA
RALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFNNP
IHPYTQSLLSAVPIPDPILERQKELVVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 918 bp

>NTDB_id=1136675 DQL07_RS01390 WP_111702797.1 252857..253774(+) (amiF) [Streptococcus pyogenes strain NCTC12069]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAATCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGCTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAGTCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAGCGGATCGGTATCGCT
AGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAGCCGATTTCAGCTTTGGACGTTTCCGTTCGCGCACAGGT
TTTAAACCTTCTCAAACGGATGCAAGCCGAAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCGTTCGCT
TTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAATAACCCA
ATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACTTGTTGT
CTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTTGGGCAA
ACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (228-260)

• ABC transporter (ABC_tran) (25-176)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	81.699	100	0.82
amiF	Streptococcus thermophilus LMD-9	81.373	100	0.816
amiF	Streptococcus salivarius strain HSISS4	81.373	100	0.816