Detailed information NTG1136410

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQL05_RS01380
• Genome accession: NZ_LS483322
• Coordinates: 253677..254600 (+)
• Length: 307 a.a.
• NCBI ID: WP_109828742.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC12066
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 248677..259600

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL05_RS01365 (NCTC12066_00274)	amiC	250177..251679 (+)	1503	WP_002992227.1	ABC transporter permease	Regulator
DQL05_RS01370 (NCTC12066_00275)	amiD	251679..252605 (+)	927	WP_002986004.1	oligopeptide ABC transporter permease OppC	Regulator
DQL05_RS01375 (NCTC12066_00276)	amiE	252614..253684 (+)	1071	WP_002992231.1	ABC transporter ATP-binding protein	Regulator
DQL05_RS01380 (NCTC12066_00277)	amiF	253677..254600 (+)	924	WP_109828742.1	ABC transporter ATP-binding protein	Regulator
DQL05_RS09200	-	254638..254727 (-)	90	WP_109821088.1	IS3 family transposase	-
DQL05_RS08930	-	254748..254993 (-)	246	WP_186789748.1	transposase	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34643.84 Da
• Isoelectric Point: 6.7095

>NTDB_id=1136410 DQL05_RS01380 WP_109828742.1 253677..254600(+) (amiF) [Streptococcus pyogenes strain NCTC12066]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAGKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELVVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1136410 DQL05_RS01380 WP_109828742.1 253677..254600(+) (amiF) [Streptococcus pyogenes strain NCTC12066]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAATCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGCTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAGTCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGGATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAGCCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTTTTAAACCTTCTCAAACGGATGCAAGCCGGAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.026	99.674	0.818
amiF	Streptococcus thermophilus LMD-9	81.699	99.674	0.814
amiF	Streptococcus salivarius strain HSISS4	81.699	99.674	0.814