Detailed information NTG1135979

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: DQL89_RS06575
• Genome accession: NZ_LS483313
• Coordinates: 1399605..1402019 (+)
• Length: 804 a.a.
• NCBI ID: WP_103363653.1
• Uniprot ID: -
• Organism: Staphylococcus simulans strain NCTC11046
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1394605..1407019

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL89_RS06550 (NCTC11046_01349)	-	1395084..1395290 (+)	207	WP_002481109.1	CsbD family protein	-
DQL89_RS06555 (NCTC11046_01350)	-	1395388..1396392 (-)	1005	WP_002481108.1	LLM class flavin-dependent oxidoreductase	-
DQL89_RS06560 (NCTC11046_01351)	-	1396575..1397717 (+)	1143	WP_103363652.1	cysteine desulfurase family protein	-
DQL89_RS06565 (NCTC11046_01352)	mnmA	1397720..1398832 (+)	1113	WP_002481106.1	tRNA 2-thiouridine(34) synthase MnmA	-
DQL89_RS06570 (NCTC11046_01353)	-	1398934..1399602 (+)	669	WP_002481105.1	tetratricopeptide repeat protein	-
DQL89_RS06575 (NCTC11046_01354)	recD2	1399605..1402019 (+)	2415	WP_103363653.1	ATP-dependent RecD-like DNA helicase	Machinery gene
DQL89_RS06580 (NCTC11046_01356)	alaS	1402330..1404960 (+)	2631	WP_070626376.1	alanine--tRNA ligase	-
DQL89_RS06585 (NCTC11046_01357)	-	1405029..1405292 (+)	264	WP_103363654.1	IreB family regulatory phosphoprotein	-
DQL89_RS06590 (NCTC11046_01358)	ruvX	1405296..1405721 (+)	426	WP_002481101.1	Holliday junction resolvase RuvX	-
DQL89_RS06595 (NCTC11046_01359)	-	1405746..1406057 (+)	312	WP_002481100.1	DUF1292 domain-containing protein	-
DQL89_RS06600 (NCTC11046_01360)	-	1406300..1406941 (+)	642	WP_103363655.1	O-methyltransferase	-

Sequence

Protein

• Length: 804 a.a.
• Molecular weight: 90565.92 Da
• Isoelectric Point: 4.5138

>NTDB_id=1135979 DQL89_RS06575 WP_103363653.1 1399605..1402019(+) (recD2) [Staphylococcus simulans strain NCTC11046]
MENPTLFDYSMVKGTVEAILFQNKDNFYTVLKVDPIETNEDFDNMPTIVGFFPEIAEGDVYTFKGQAVTHPRYGKQLKAE
TFEKEVPQTKDAIISYLSSDLFKGVGKKTAENIVNTLGENTINKILDDRSVLEEVPNLSKKKQSQIADQIYSNQEVEKIM
IRLHDLGFGPKLAMSIYQVYQSDTLQTIEKNPYDLVYDVRGVGFHKADTLAKNLGIEYNAPERLKAGLLYTIEEECIKQG
HTFLPKDYVLETSLEMLSKGYDQTIDASMLEKVILELTEESKLVEADETLSIPSLYYSEVKSVQNLYRIASHQAKLENIE
QSDLQINIGEIEEMNGVNYASSQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYAETHGLSLSYDDYQEDDYPIALA
APTGRAAKRLQESTGLEAMTIHRLIGWSQDTKPEDVLENEITAKLIIIDEMSMVDTWLFHQFLNAVPIDAQIILVGDEDQ
LPSVGPGQVFKDLIDAKVIPRVNLTEVYRQQDGSSIIELAHKMKLGQPIDITERFHDRSFIPCTAEQIPDVVNKVVSSAV
KKGYDMSDIQVLAPMYRGSAGIKRLNKVLQDILNPKAEDAREIEFGEAVFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFW
ARENELNKDILVVDFEGNEITFTKQDMMELTHAYCTSIHKAQGSEFPIVIMPIVKQYYRMLQRPIIYTGLTRAKQSLVFL
GDSQAFDIGMKTHGQVRMTRLAQLLRDYFGHESETNEEQADEQINDQTTSAPAQQLVELTEATIYEIDPMIGMGKVTPYT
FNHE

Nucleotide

• Length: 2415 bp

>NTDB_id=1135979 DQL89_RS06575 WP_103363653.1 1399605..1402019(+) (recD2) [Staphylococcus simulans strain NCTC11046]
TTGGAGAACCCTACATTGTTTGACTATTCGATGGTCAAAGGAACAGTAGAAGCAATCTTATTTCAAAATAAAGATAATTT
CTATACCGTATTAAAAGTAGATCCGATTGAAACCAATGAAGATTTTGATAATATGCCTACAATTGTGGGGTTCTTTCCTG
AAATTGCTGAAGGCGATGTTTATACCTTCAAAGGTCAAGCTGTGACACACCCTAGATACGGCAAACAATTAAAAGCTGAA
ACTTTCGAAAAAGAAGTACCGCAAACAAAAGATGCGATTATCAGTTACTTATCAAGTGATTTGTTTAAAGGTGTCGGTAA
GAAAACGGCTGAAAATATCGTAAATACACTTGGTGAAAATACCATCAATAAAATTTTAGATGATCGTTCAGTCCTAGAAG
AAGTACCGAATTTATCTAAAAAGAAACAAAGCCAAATCGCAGATCAAATCTACAGTAATCAAGAAGTAGAAAAAATTATG
ATCAGACTTCATGATTTAGGCTTCGGTCCGAAATTAGCGATGAGCATCTATCAAGTTTATCAAAGTGACACCTTACAAAC
GATAGAGAAAAATCCATATGATCTTGTCTATGATGTACGCGGTGTCGGTTTCCACAAAGCAGATACTTTAGCTAAGAATT
TAGGCATAGAATATAACGCCCCTGAACGCTTAAAAGCAGGTCTGCTTTATACGATAGAAGAAGAATGTATTAAACAAGGT
CATACATTTTTACCTAAAGATTATGTATTAGAAACTTCGTTAGAGATGTTAAGCAAGGGATATGACCAAACGATAGATGC
CAGTATGTTAGAAAAAGTGATACTTGAATTGACAGAAGAAAGTAAGTTGGTGGAAGCGGATGAAACACTTTCTATCCCAA
GCTTATATTATTCAGAAGTCAAAAGTGTGCAGAACCTGTATCGTATTGCGTCACATCAAGCTAAATTAGAGAATATTGAA
CAATCTGACTTACAAATCAATATTGGTGAAATCGAGGAAATGAATGGAGTCAACTACGCATCTTCTCAAAAAGAAGCACT
TGAAACAGCGATTAATTCAAAAGTCATGCTGCTGACAGGTGGTCCAGGTACCGGTAAAACAACGGTTATCAAAGGCATCG
TTGAACTCTATGCGGAAACGCATGGTTTATCCTTATCCTATGACGATTACCAAGAAGATGATTATCCGATAGCGCTTGCT
GCACCTACAGGACGTGCAGCCAAACGTTTACAAGAATCAACTGGACTTGAAGCAATGACCATCCATCGTTTAATCGGCTG
GAGTCAAGATACCAAGCCTGAAGATGTCTTAGAAAATGAAATTACTGCTAAGCTCATCATTATTGATGAAATGTCAATGG
TAGATACATGGTTGTTTCATCAGTTCTTGAATGCAGTACCGATTGATGCACAAATCATTTTAGTCGGAGATGAAGACCAA
TTACCATCAGTCGGCCCAGGACAAGTGTTTAAAGATTTAATTGATGCGAAAGTCATTCCACGTGTTAATTTAACTGAAGT
CTACCGTCAACAAGATGGTTCTAGTATCATTGAACTCGCACATAAAATGAAATTAGGTCAGCCGATAGACATTACTGAGC
GATTCCACGATCGCAGCTTTATTCCTTGTACAGCTGAACAAATACCAGATGTAGTCAATAAAGTGGTGAGTTCTGCTGTT
AAAAAAGGCTACGATATGAGCGATATTCAAGTCTTGGCTCCGATGTATCGCGGCAGTGCCGGCATTAAGCGTTTAAATAA
AGTATTACAAGATATCTTGAATCCTAAAGCTGAAGATGCAAGAGAGATTGAGTTCGGAGAAGCGGTCTTTAGAAAGGGCG
ACAAAGTCTTACAACTTGTGAATCGTCCTAATGATAATATTTTCAATGGTGATATCGGTGTGATTGTCGGTATCTTCTGG
GCACGTGAAAACGAATTAAATAAAGATATACTTGTCGTCGATTTTGAAGGTAATGAAATTACATTTACCAAACAAGATAT
GATGGAGTTAACACATGCTTATTGTACTTCCATTCATAAAGCACAAGGTTCAGAGTTTCCAATTGTTATTATGCCGATTG
TAAAACAATATTATCGCATGTTGCAGCGTCCGATTATCTATACAGGACTTACACGTGCCAAACAATCTTTAGTTTTTCTT
GGTGATAGCCAAGCCTTTGACATCGGTATGAAGACCCATGGGCAAGTACGTATGACGAGACTCGCACAATTGCTCAGAGA
TTACTTCGGTCATGAGAGTGAAACAAATGAAGAACAAGCAGATGAACAAATAAATGATCAAACAACCTCAGCACCTGCAC
AACAACTCGTAGAATTAACAGAAGCAACGATTTATGAAATTGACCCGATGATTGGTATGGGTAAGGTCACACCTTATACT
TTTAATCATGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• AAA domain (AAA_30) (339-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.937	99.378	0.496