Detailed information NTG1135522

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: DQL62_RS08185
• Genome accession: NZ_LS483300
• Coordinates: 1608319..1610796 (-)
• Length: 825 a.a.
• NCBI ID: WP_111725118.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain NCTC7485
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1603319..1615796

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL62_RS08160 (NCTC7485_01543)	-	1603345..1603983 (-)	639	WP_000342268.1	O-methyltransferase	-
DQL62_RS08165 (NCTC7485_01544)	-	1604268..1604576 (-)	309	WP_000134779.1	DUF1292 domain-containing protein	-
DQL62_RS08170 (NCTC7485_01545)	ruvX	1604591..1605019 (-)	429	WP_000939058.1	Holliday junction resolvase RuvX	-
DQL62_RS08175 (NCTC7485_01546)	-	1605023..1605283 (-)	261	WP_000426912.1	IreB family regulatory phosphoprotein	-
DQL62_RS08180 (NCTC7485_01547)	alaS	1605346..1607976 (-)	2631	WP_000734067.1	alanine--tRNA ligase	-
DQL62_RS08185 (NCTC7485_01549)	recD2	1608319..1610796 (-)	2478	WP_111725118.1	ATP-dependent RecD-like DNA helicase	Machinery gene
DQL62_RS08190 (NCTC7485_01550)	-	1610798..1611466 (-)	669	WP_000567017.1	tetratricopeptide repeat protein	-
DQL62_RS08195 (NCTC7485_01551)	mnmA	1611932..1613050 (-)	1119	WP_000066095.1	tRNA 2-thiouridine(34) synthase MnmA	-
DQL62_RS08200 (NCTC7485_01552)	-	1613051..1614193 (-)	1143	WP_000409166.1	cysteine desulfurase family protein	-
DQL62_RS08205 (NCTC7485_01553)	-	1614505..1615518 (+)	1014	WP_000985871.1	LLM class flavin-dependent oxidoreductase	-

Sequence

Protein

• Length: 825 a.a.
• Molecular weight: 93087.89 Da
• Isoelectric Point: 4.4681

>NTDB_id=1135522 DQL62_RS08185 WP_111725118.1 1608319..1610796(-) (recD2) [Staphylococcus aureus strain NCTC7485]
MSDPTLFDYSMIKGTVEAILFQNSDNFYTVLKVDTIETNEDFDTMPTVVGFLPNIVEGDVYTFKGQVVDHPRYGKQLKAE
TFEKEMPQTKEAIISYLSSDLFKGVGKKTAQNIVNTLGDNAINDILDDHSVLEKVSGLSKKKQKQIAEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYLGDTLTILDRNPYQLIYDIKGIGFNKADQLARNIGIAYNDNERLKAVLLYTLEEECIKQG
HTYLPINVVIDLTVDVLNYQDEEVIEPEKLDEMLQYLNEEKRLIIDNEQVAIPSLYYSEIKSVQNLFRIKTHTNKLTEIE
QSDLQMHIGEIEDANQVNYAASQKEALQTAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYVNDDYPVVLA
APTGRASKRLQESTGLEAMTIHRLIGWNQDTKPEDILENEINARLIIIDEMSMVDTWLFHQFLSAVPLDAQLIFVGDEDQ
LPSVGPGQVFKDLIESKAIPRVNLTEVYRQQDGSSIIELAHRMKLGQKIDITQRFHDRIFINCQANQIPTVVEKVVTSAV
NKGYTMADIQVLAPMYKGNAGIKRLNQVLQDILNPKKKDTREIEFGDVVFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFW
AKENALNKDVLVVDFEGNEITFTKQDMMELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKTSLVLL
GDPEAFDIGLKTNGQARLTQLCTLLKNYFNSEDEEMLEDTATNDTGASQTTIDEQVEAPMSSNDSEEVTSDSTKTDTNVL
TEATMFKIDPMINMGEITPYDFIER

Nucleotide

• Length: 2478 bp

>NTDB_id=1135522 DQL62_RS08185 WP_111725118.1 1608319..1610796(-) (recD2) [Staphylococcus aureus strain NCTC7485]
ATGTCAGACCCTACACTATTTGATTATTCAATGATCAAAGGTACTGTTGAAGCGATATTGTTTCAAAACAGTGATAATTT
TTATACAGTGCTTAAAGTAGATACTATTGAAACAAATGAAGACTTTGATACAATGCCAACTGTTGTAGGGTTTCTTCCGA
ATATTGTTGAAGGAGATGTCTACACATTTAAAGGTCAAGTTGTTGATCATCCCCGTTATGGTAAACAATTAAAAGCAGAG
ACTTTTGAAAAAGAAATGCCACAAACGAAAGAAGCAATTATAAGTTATTTATCAAGCGATTTGTTTAAAGGTGTAGGTAA
AAAGACAGCTCAAAATATTGTTAATACATTAGGTGATAATGCGATAAATGATATATTAGATGACCATTCAGTTCTAGAAA
AAGTTTCGGGATTATCTAAAAAGAAACAGAAACAAATTGCAGAACAAATTTCAGCAAATCAAGAATCTGAAAAAATAATG
ATTCGTTTACATGATTTAGGGTTTGGTCCTAAACTTTCAATGGCAATTTATCAGTTTTATCTCGGTGATACACTGACTAT
TTTAGATCGAAATCCATATCAATTGATTTATGATATTAAAGGTATTGGTTTTAATAAAGCAGATCAACTTGCTAGAAATA
TTGGTATCGCTTATAACGATAATGAACGATTAAAAGCTGTGTTGCTCTATACGTTAGAAGAAGAATGTATTAAACAGGGA
CATACATATTTGCCTATCAATGTTGTTATAGACTTAACCGTTGATGTATTAAATTATCAAGATGAAGAAGTCATCGAACC
TGAAAAATTAGACGAAATGTTGCAATACTTAAATGAGGAAAAACGACTAATTATTGACAATGAACAAGTTGCAATTCCAA
GTTTGTATTATTCTGAAATCAAAAGTGTTCAAAACTTATTCAGAATAAAGACGCATACAAATAAACTTACGGAAATTGAA
CAGTCAGATTTACAAATGCATATTGGTGAAATAGAAGATGCGAATCAAGTGAACTATGCAGCTTCACAAAAAGAAGCTTT
GCAAACGGCTATCAATTCTAAGGTGATGCTATTAACCGGTGGACCGGGAACAGGAAAGACGACAGTAATTAAAGGCATTG
TAGAATTATATGCTGAGATTCATGGCTTATCATTAGATTATGATGATTATGTCAATGATGATTATCCAGTTGTATTAGCA
GCGCCAACAGGAAGAGCGTCCAAGAGACTACAAGAGTCAACTGGATTAGAAGCAATGACGATTCATCGTTTAATAGGTTG
GAATCAAGACACAAAGCCAGAGGATATATTAGAAAATGAAATAAACGCACGACTCATAATCATTGATGAGATGTCTATGG
TAGATACTTGGTTGTTCCACCAATTTTTAAGTGCAGTTCCTTTAGATGCACAATTGATATTTGTAGGTGATGAGGACCAA
TTGCCTTCTGTAGGTCCTGGTCAAGTATTTAAAGATTTAATTGAATCGAAAGCTATACCACGAGTTAATCTGACTGAAGT
ATATCGTCAACAAGATGGTTCAAGCATTATAGAATTAGCACATCGAATGAAGTTGGGTCAGAAAATTGATATTACACAGC
GTTTTCATGATAGAATTTTTATTAACTGTCAGGCAAACCAAATACCAACAGTTGTTGAGAAGGTAGTTACTAGTGCTGTT
AATAAAGGGTATACTATGGCTGATATTCAAGTGCTTGCACCAATGTATAAAGGAAATGCTGGTATTAAACGTTTAAATCA
AGTTTTACAAGATATTTTAAACCCTAAAAAGAAAGACACACGAGAAATTGAGTTTGGTGATGTAGTCTTTAGAAAAGGTG
ACAAAGTATTACAACTTGTTAATAGGCCAAATGATAACATATTTAATGGTGACATAGGAGTTATTGTTGGTATTTTTTGG
GCGAAAGAAAATGCCCTTAATAAAGATGTACTTGTTGTGGATTTTGAAGGTAATGAAATTACATTTACGAAACAAGACAT
GATGGAATTAACGCATGCATATTGTACATCAATCCATAAATCACAAGGTTCAGAATTTCCTATTGTTATAATGCCTATTG
TTAAACAGTATTTTAGAATGTTACAAAGACCGATATTATATACTGGTTTAACTAGAGCGAAAACGAGTTTAGTTTTACTT
GGTGATCCGGAAGCATTTGATATTGGATTGAAAACAAATGGTCAAGCGCGTTTAACACAATTATGTACATTGTTGAAAAA
TTATTTTAATTCAGAAGATGAAGAAATGCTGGAAGACACAGCAACTAATGATACAGGAGCTTCACAAACGACAATAGATG
AACAAGTAGAAGCGCCAATGTCATCGAATGATAGTGAAGAAGTTACGTCTGATTCAACAAAAACAGATACAAATGTATTA
ACGGAAGCTACAATGTTTAAAATTGACCCAATGATTAATATGGGAGAAATCACGCCGTATGACTTTATAGAACGTTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-720)

• AAA domain (AAA_30) (339-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	52.722	91.273	0.481