Detailed information NTG1135088

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: JX313_RS08400
• Genome accession: NZ_LR999861
• Coordinates: 1622908..1625304 (-)
• Length: 798 a.a.
• NCBI ID: WP_003741024.1
• Uniprot ID: -
• Organism: Listeria monocytogenes isolate QI0054
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1617908..1630304

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JX313_RS08380 (QI0054_1689)	-	1618374..1619069 (-)	696	WP_003725979.1	ABC transporter ATP-binding protein	-
JX313_RS08385 (QI0054_1690)	-	1619078..1620577 (-)	1500	WP_003725980.1	ABC transporter permease	-
JX313_RS08390 (QI0054_1691)	pieR	1620744..1621430 (+)	687	WP_003725981.1	two component system response regulator PieR	-
JX313_RS08395 (QI0054_1692)	pieS	1621427..1622866 (+)	1440	WP_003741021.1	two component system sensor histidine kinase PieS	-
JX313_RS08400 (QI0054_1693)	recD2	1622908..1625304 (-)	2397	WP_003741024.1	ATP-dependent RecD-like DNA helicase	Machinery gene
JX313_RS08405 (QI0054_1694)	-	1625332..1625970 (-)	639	WP_072572675.1	tetratricopeptide repeat protein	-
JX313_RS08410 (QI0054_1695)	-	1626011..1626751 (-)	741	WP_003725985.1	alpha/beta hydrolase	-
JX313_RS08415 (QI0054_1696)	mnmA	1626870..1627985 (-)	1116	WP_003727410.1	tRNA 2-thiouridine(34) synthase MnmA	-
JX313_RS08420 (QI0054_1697)	-	1628004..1629152 (-)	1149	WP_003731166.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90103.20 Da
• Isoelectric Point: 4.8081

>NTDB_id=1135088 JX313_RS08400 WP_003741024.1 1622908..1625304(-) (recD2) [Listeria monocytogenes isolate QI0054]
MAEQESLALFNDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAK
FGQQFKADRFRKEMPQSRAGLINYLSGELFKGIGKVTAENIVDTIGDDAITKILSDPSLLNTVPKLPSGAAESLLASLRE
NQGLEHVMVGLNEYGFGPQLSMKIFQAYKQNAIEVLENNPYKLIEDIKGIGFQRADELGRKLGLGGNHPERLRAGILFML
DSVCMQQGHVYMEQEVLLGEVTYLLEESEGIRIDQNILVAQVEKLAEEQKIITENTRVYMPSLYYSESGFAYHVKRMLKQ
TEYQEQFPQSEFLLALGELEERIGVHYGDSQRQALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKD
GATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQ
VVLVGDQDQLPSVGPGQVLKDILQSEQIPTVALSDIYRQKDGSSIIEMAHYIKEGMLPADFTKNSADRSFFHCTVNQIGD
VVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGDIKYRVHDKVLQLINQPEKNVFN
GDIGEIVSIIYAKENTEKQDLIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLIYTG
VTRSKQFLILCGEEEAFRMGIERIDENKRNTTLSERLMSEDVLLEQMTNKRILTAENITEIDPMIGMEGITPEQFMAG

Nucleotide

• Length: 2397 bp

>NTDB_id=1135088 JX313_RS08400 WP_003741024.1 1622908..1625304(-) (recD2) [Listeria monocytogenes isolate QI0054]
ATGGCTGAACAAGAATCACTCGCTCTATTTAACGATACACCAGAAGAACTTTTCATGAAGGGCACGATGTTGTCCACCAT
TTTTTACAATGCCGAAAACCTCTTTTCTGTTGTACGAATATTGGTCAAAGAAACCAATGCGGATTGGGACGAAAAAGATA
TTATCGTAACCGGTTTTTTCCCAGCGCTTCACGAGCAAGAAGTATACACTTTCTACGGGAAAATGCAGGAACATGCTAAA
TTTGGTCAACAGTTTAAAGCAGACCGGTTTCGTAAGGAAATGCCACAATCACGAGCGGGCTTAATTAATTATCTATCCGG
TGAACTTTTTAAAGGCATTGGTAAAGTCACTGCTGAAAATATTGTGGATACGATTGGCGACGATGCTATCACAAAAATTT
TATCCGATCCGAGCTTGCTAAATACAGTACCTAAGTTGCCATCTGGCGCGGCAGAAAGTTTGCTTGCTTCCCTTAGAGAA
AATCAAGGGTTGGAGCATGTGATGGTCGGATTAAACGAATATGGCTTTGGTCCGCAATTATCCATGAAAATTTTCCAGGC
CTATAAACAAAATGCGATTGAAGTGTTAGAGAATAATCCTTATAAATTGATTGAGGATATAAAAGGGATTGGTTTTCAGC
GTGCCGATGAGCTTGGACGGAAACTCGGTCTTGGCGGGAATCATCCAGAACGGCTTCGTGCTGGGATTTTATTTATGTTA
GATTCGGTTTGTATGCAACAAGGTCATGTATATATGGAGCAAGAGGTTCTGCTCGGAGAAGTAACTTATTTACTGGAAGA
AAGCGAAGGCATTCGTATTGACCAAAATATTTTAGTAGCTCAAGTAGAAAAATTAGCTGAGGAACAAAAGATTATTACGG
AAAATACACGTGTTTACATGCCATCACTCTATTATTCAGAGAGCGGCTTTGCATATCACGTGAAGCGAATGCTTAAACAA
ACAGAATACCAAGAACAATTTCCGCAATCCGAATTTCTGCTAGCTCTAGGAGAATTAGAAGAACGGATTGGCGTTCACTA
CGGAGATTCGCAGCGACAGGCTTTAGAACAAGCTTTAATGTCTCCGATGCTCGTACTTACTGGTGGTCCCGGGACAGGGA
AAACAACAGTCATTAAAGGGATAGTGGAGCTTTATGCGGAACTAAATGGTGTGAGCCTTGATCCCCATGCTTACAAAGAT
GGAGCGACTTTCCCCGTTCTTCTTGCTGCTCCAACTGGCCGTGCCGCTAAACGGATGTCTGAGTCAACAGGGCTTCCTGC
GATGACCATTCACCGTTTACTTGGAATGAATGGTCAAGAACAAATGGATGATGATGCAGAAAGACTGATTGATGGACGAC
TGTTGATAGTGGATGAGATGTCAATGGTAGATATTTGGCTTGCTAATCAATTATTCCGTGCTTTACCAGCGCACATGCAA
GTGGTACTTGTTGGCGACCAAGATCAGTTGCCTTCAGTCGGACCAGGTCAAGTACTCAAAGATATTCTGCAATCTGAACA
AATTCCAACTGTAGCTCTTTCAGATATTTACCGCCAAAAGGATGGTTCTTCCATTATCGAAATGGCGCATTATATAAAAG
AAGGCATGTTGCCAGCTGATTTCACCAAAAATAGCGCCGATCGCTCCTTTTTTCATTGCACGGTAAATCAAATTGGTGAT
GTAGTCGAACAAGTGGTAAAAAATGCAAAAAACAAAGGATTTCGAGCAAAAGACATCCAAGTTTTAGCACCAATGTATCG
TGGTCCTGCAGGCATTGATATTTTAAATAAAAAACTACAAGAAATTTTCAATCCAAATGATACAGGGCGTCGTAAAGAAG
TTCAATTTGGTGACATAAAGTATCGCGTGCATGACAAAGTACTGCAATTGATTAATCAACCAGAGAAAAATGTGTTTAAC
GGTGATATTGGTGAAATTGTGTCTATTATATACGCCAAAGAAAATACCGAAAAACAAGATCTGATTGTCGTTCAATTTGA
CCAAACAGAGGTTTCTTACTATAGGCAAGAATTTAATCAATTGACCCATGCTTATTGTTGTTCGATCCATAAAGCGCAGG
GAAGTGAATTTCCGATTGTGATTATGCCGATTGTCCGCAGTTACTACCGGATGTTACGGCGCGATTTAATATACACCGGA
GTAACGCGAAGTAAACAATTTCTCATTCTTTGCGGGGAAGAAGAAGCTTTTCGAATGGGGATAGAACGAATTGATGAAAA
TAAACGTAATACAACACTCTCTGAACGTTTAATGAGCGAAGATGTTTTATTAGAACAAATGACAAATAAACGAATTCTCA
CAGCTGAAAATATTACGGAAATTGATCCGATGATTGGAATGGAAGGGATTACTCCAGAACAATTTATGGCAGGATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (595-666)

• Helix-hairpin-helix containing domain (HHH_RecD2) (160-251)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

• AAA domain (AAA_30) (347-554)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.107	98.747	0.564