Detailed information NTG1131765

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: H1X38_RS04015
• Genome accession: NZ_LR822035
• Coordinates: 759758..760639 (+)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_1051
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 754758..765639

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1X38_RS03985 (STHERMO_0843)	-	755768..756220 (+)	453	WP_050983521.1	hypothetical protein	-
H1X38_RS03990 (STHERMO_0844)	-	756210..756713 (+)	504	WP_224102963.1	DUF4832 domain-containing protein	-
H1X38_RS03995 (STHERMO_0845)	galE	756728..757741 (+)	1014	WP_014727437.1	UDP-glucose 4-epimerase GalE	-
H1X38_RS04000 (STHERMO_0847)	-	757929..758165 (+)	237	WP_002946959.1	DUF1146 family protein	-
H1X38_RS04005 (STHERMO_0848)	murA	758235..759506 (+)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
H1X38_RS04010 (STHERMO_0849)	-	759508..759696 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
H1X38_RS04015 (STHERMO_0850)	endA	759758..760639 (+)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
H1X38_RS04020 (STHERMO_0851)	-	760711..761361 (-)	651	WP_014608375.1	amino acid ABC transporter permease	-
H1X38_RS04025 (STHERMO_0852)	-	761373..762071 (-)	699	WP_014608374.1	amino acid ABC transporter permease	-
H1X38_RS04030 (STHERMO_0853)	-	762089..762922 (-)	834	WP_014608373.1	transporter substrate-binding domain-containing protein	-
H1X38_RS04035 (STHERMO_0854)	-	762934..763701 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
H1X38_RS04040 (STHERMO_0855)	vicR	764228..764935 (+)	708	WP_011681206.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=1131765 H1X38_RS04015 WP_011681210.1 759758..760639(+) (endA) [Streptococcus thermophilus isolate STH_CIRM_1051]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=1131765 H1X38_RS04015 WP_011681210.1 759758..760639(+) (endA) [Streptococcus thermophilus isolate STH_CIRM_1051]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594