Detailed information NTG1130779

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: H0502_RS02935
• Genome accession: NZ_LR822013
• Coordinates: 589140..590021 (+)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_32
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 584140..595021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0502_RS02910 (STHERMO_0670)	-	585640..586095 (+)	456	WP_024009932.1	DUF4832 domain-containing protein	-
H0502_RS02915 (STHERMO_0671)	galE	586110..587123 (+)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
H0502_RS02920 (STHERMO_0672)	-	587311..587547 (+)	237	WP_002946959.1	DUF1146 family protein	-
H0502_RS02925 (STHERMO_0673)	murA	587617..588888 (+)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
H0502_RS02930 (STHERMO_0674)	-	588890..589078 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
H0502_RS02935 (STHERMO_0675)	endA	589140..590021 (+)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
H0502_RS02940 (STHERMO_0676)	-	590093..590743 (-)	651	WP_014608375.1	amino acid ABC transporter permease	-
H0502_RS02945 (STHERMO_0677)	-	590755..591453 (-)	699	WP_014608374.1	amino acid ABC transporter permease	-
H0502_RS02950 (STHERMO_0678)	-	591471..592304 (-)	834	WP_179970665.1	transporter substrate-binding domain-containing protein	-
H0502_RS02955 (STHERMO_0679)	-	592316..593083 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
H0502_RS02960 (STHERMO_0680)	vicR	593610..594317 (+)	708	WP_011681206.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=1130779 H0502_RS02935 WP_011681210.1 589140..590021(+) (endA) [Streptococcus thermophilus isolate STH_CIRM_32]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=1130779 H0502_RS02935 WP_011681210.1 589140..590021(+) (endA) [Streptococcus thermophilus isolate STH_CIRM_32]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594