Detailed information NTG1128449

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FQT67_RS09445
• Genome accession: NZ_LR595857
• Coordinates: 1888270..1889202 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus sp. NCTC 11567 strain NCTC11567
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1883270..1894202

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FQT67_RS09420 (NCTC11567_01953)	tsaD	1883760..1884776 (-)	1017	WP_003056674.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
FQT67_RS09425 (NCTC11567_01954)	rimI	1884766..1885191 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
FQT67_RS09430 (NCTC11567_01955)	tsaB	1885193..1885891 (-)	699	WP_046177230.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
FQT67_RS09435 (NCTC11567_01956)	-	1886177..1886407 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
FQT67_RS09440 (NCTC11567_01957)	rnjA	1886409..1888091 (+)	1683	WP_003056700.1	ribonuclease J1	-
FQT67_RS09445 (NCTC11567_01958)	amiF	1888270..1889202 (-)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
FQT67_RS09450 (NCTC11567_01959)	oppD	1889195..1890247 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
FQT67_RS09455 (NCTC11567_01960)	-	1890259..1891290 (-)	1032	WP_046177231.1	ABC transporter permease	-
FQT67_RS09460 (NCTC11567_01961)	-	1891300..1892214 (-)	915	WP_003052794.1	ABC transporter permease	-
FQT67_RS09465 (NCTC11567_01962)	-	1892482..1894137 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=1128449 FQT67_RS09445 WP_003060110.1 1888270..1889202(-) (amiF) [Streptococcus sp. NCTC 11567 strain NCTC11567]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=1128449 FQT67_RS09445 WP_003060110.1 1888270..1889202(-) (amiF) [Streptococcus sp. NCTC 11567 strain NCTC11567]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACTTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526