Detailed information NTG1127878

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FGL21_RS09575
• Genome accession: NZ_LR594047
• Coordinates: 1917680..1918612 (-)
• Length: 310 a.a.
• NCBI ID: WP_138128167.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1912680..1923612

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL21_RS09550 (NCTC11554_01988)	tsaD	1913170..1914186 (-)	1017	WP_003056674.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
FGL21_RS09555 (NCTC11554_01989)	rimI	1914176..1914601 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
FGL21_RS09560 (NCTC11554_01990)	tsaB	1914603..1915301 (-)	699	WP_003062223.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
FGL21_RS09565 (NCTC11554_01991)	-	1915587..1915817 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
FGL21_RS09570 (NCTC11554_01992)	rnjA	1915819..1917501 (+)	1683	WP_003056700.1	ribonuclease J1	-
FGL21_RS09575 (NCTC11554_01993)	amiF	1917680..1918612 (-)	933	WP_138128167.1	ATP-binding cassette domain-containing protein	Regulator
FGL21_RS09580 (NCTC11554_01994)	oppD	1918605..1919657 (-)	1053	WP_003058019.1	ABC transporter ATP-binding protein	Regulator
FGL21_RS09585 (NCTC11554_01995)	-	1919669..1920700 (-)	1032	WP_003058013.1	ABC transporter permease	-
FGL21_RS09590 (NCTC11554_01996)	-	1920710..1921624 (-)	915	WP_003052794.1	ABC transporter permease	-
FGL21_RS09595 (NCTC11554_01997)	-	1921892..1923547 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35153.95 Da
• Isoelectric Point: 6.6437

>NTDB_id=1127878 FGL21_RS09575 WP_138128167.1 1917680..1918612(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDINEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=1127878 FGL21_RS09575 WP_138128167.1 1917680..1918612(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTAATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.426	98.387	0.535
amiF	Streptococcus thermophilus LMG 18311	54.098	98.387	0.532
amiF	Streptococcus salivarius strain HSISS4	53.77	98.387	0.529