Detailed information NTG1127818

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FGL18_RS09015
• Genome accession: NZ_LR594046
• Coordinates: 1871523..1872455 (-)
• Length: 310 a.a.
• NCBI ID: WP_115245665.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain NCTC6403
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1866523..1877455

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL18_RS08990 (NCTC6403_01848)	tsaD	1867011..1868027 (-)	1017	WP_138126525.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
FGL18_RS08995 (NCTC6403_01849)	rimI	1868017..1868442 (-)	426	WP_115245668.1	ribosomal protein S18-alanine N-acetyltransferase	-
FGL18_RS09000 (NCTC6403_01850)	tsaB	1868444..1869142 (-)	699	WP_138126527.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
FGL18_RS09005 (NCTC6403_01851)	-	1869428..1869658 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
FGL18_RS09010 (NCTC6403_01852)	rnjA	1869660..1871342 (+)	1683	WP_003056700.1	ribonuclease J1	-
FGL18_RS09015 (NCTC6403_01853)	amiF	1871523..1872455 (-)	933	WP_115245665.1	ATP-binding cassette domain-containing protein	Regulator
FGL18_RS09020 (NCTC6403_01854)	oppD	1872448..1873500 (-)	1053	WP_138126529.1	ABC transporter ATP-binding protein	Regulator
FGL18_RS09025 (NCTC6403_01855)	-	1873512..1874543 (-)	1032	WP_046177231.1	ABC transporter permease	-
FGL18_RS09030 (NCTC6403_01856)	-	1874553..1875467 (-)	915	WP_003052794.1	ABC transporter permease	-
FGL18_RS09035 (NCTC6403_01857)	-	1875735..1877390 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35222.07 Da
• Isoelectric Point: 6.7324

>NTDB_id=1127818 FGL18_RS09015 WP_115245665.1 1871523..1872455(-) (amiF) [Streptococcus dysgalactiae strain NCTC6403]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYR

Nucleotide

• Length: 933 bp

>NTDB_id=1127818 FGL18_RS09015 WP_115245665.1 1871523..1872455(-) (amiF) [Streptococcus dysgalactiae strain NCTC6403]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCTGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGACCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTAACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAATAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTGAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTTGATGTGTC
GATTCAGGCCCAGGTGGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAGCCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTGTATGATCCAAGTCAAGAATTAGACGGCCAAGAACGTCAGATGCATGAGATTACTCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCGTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526