Detailed information NTG1127690

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FGL05_RS07290
• Genome accession: NZ_LR594044
• Coordinates: 1482338..1483270 (-)
• Length: 310 a.a.
• NCBI ID: WP_061409237.1
• Uniprot ID: -
• Organism: Streptococcus lutetiensis strain NCTC8796
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1477338..1488270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL05_RS07260 (NCTC8796_01538)	-	1477456..1478454 (-)	999	WP_058833338.1	SIS domain-containing protein	-
FGL05_RS07265 (NCTC8796_01539)	-	1478490..1479308 (-)	819	WP_111713070.1	PTS system mannose/fructose/sorbose family transporter subunit IID	-
FGL05_RS07270 (NCTC8796_01540)	-	1479295..1480071 (-)	777	WP_111712626.1	PTS sugar transporter subunit IIC	-
FGL05_RS07275 (NCTC8796_01541)	-	1480082..1480549 (-)	468	WP_058833240.1	PTS sugar transporter subunit IIB	-
FGL05_RS07280 (NCTC8796_01542)	-	1480565..1480978 (-)	414	WP_058833241.1	hypothetical protein	-
FGL05_RS07285 (NCTC8796_01543)	-	1481219..1482172 (+)	954	WP_111712625.1	IS30 family transposase	-
FGL05_RS07290 (NCTC8796_01544)	amiF	1482338..1483270 (-)	933	WP_061409237.1	ATP-binding cassette domain-containing protein	Regulator
FGL05_RS07295 (NCTC8796_01545)	oppD	1483270..1484316 (-)	1047	WP_111712624.1	ABC transporter ATP-binding protein	Regulator
FGL05_RS07300 (NCTC8796_01546)	-	1484328..1485359 (-)	1032	WP_111712623.1	ABC transporter permease	-
FGL05_RS07305 (NCTC8796_01547)	-	1485371..1486285 (-)	915	WP_020916177.1	ABC transporter permease	-
FGL05_RS07310 (NCTC8796_01548)	-	1486398..1488053 (-)	1656	WP_111712622.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 34995.83 Da
• Isoelectric Point: 6.0651

>NTDB_id=1127690 FGL05_RS07290 WP_061409237.1 1482338..1483270(-) (amiF) [Streptococcus lutetiensis strain NCTC8796]
MTENRKKLVELKNVSLTFNEGKKNEVKAINNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDISGGEIDFNGETVSNL
KGKKLHEFRKNVQMIFQDPQASLNARMKIRDIVAEGLDIHKLVNSKEERDEKVQELLSLVGLNKDHMTRYPHEFSGGQRQ
RIGIARALAVQPKFIIADEPISALDVSIQAQVVNLMQKLQREKGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSED
VYNNPIHPYTKSLLSAIPEPDPESERERVHQAYDPSAELDGQEREMREITPGHFVLSTEAEAEEYKKALS

Nucleotide

• Length: 933 bp

>NTDB_id=1127690 FGL05_RS07290 WP_061409237.1 1482338..1483270(-) (amiF) [Streptococcus lutetiensis strain NCTC8796]
ATGACTGAAAATAGAAAAAAGCTTGTTGAACTTAAAAATGTCTCTTTGACTTTCAACGAAGGCAAAAAGAATGAAGTAAA
AGCTATCAACAACGTCAGCTTCGATATCTATGAAGGTGAAGTCTTTGGTCTAGTTGGTGAATCAGGTTCTGGTAAAACAA
CTGTTGGACGTGCTATTTTAAAACTTTACGATATTAGTGGTGGTGAAATCGACTTTAACGGAGAAACGGTTTCTAACCTT
AAAGGTAAAAAACTACATGAATTCCGTAAAAATGTCCAAATGATTTTCCAAGATCCACAAGCCAGTCTTAATGCACGTAT
GAAAATCCGTGATATCGTTGCTGAAGGTCTTGATATTCACAAACTTGTTAATAGTAAAGAAGAACGTGATGAAAAAGTTC
AAGAATTGCTTTCTCTAGTAGGTTTGAACAAAGATCACATGACTCGTTACCCACACGAATTTTCTGGTGGTCAACGTCAA
CGTATTGGTATTGCACGTGCTCTTGCTGTACAACCAAAATTCATTATTGCTGATGAACCAATTTCTGCGCTTGACGTGTC
TATTCAAGCTCAAGTTGTTAATTTGATGCAAAAACTTCAACGCGAAAAAGGCTTAACTTACCTCTTCATCGCTCACGATT
TGTCAATGGTTAAATACATTTCAGATCGTATTGGAGTTATGCACTGGGGTAAAATGCTTGAAATTGGAACATCTGAAGAT
GTTTACAACAATCCAATTCATCCATATACTAAAAGTCTGTTGTCTGCAATTCCAGAACCAGATCCAGAATCTGAACGTGA
ACGTGTACACCAAGCTTATGATCCGAGTGCAGAACTTGATGGTCAAGAACGTGAAATGCGTGAAATCACACCAGGACATT
TTGTACTTTCTACAGAAGCAGAAGCAGAAGAATACAAAAAAGCATTATCATAA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-267)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	55.7	99.032	0.552
amiF	Streptococcus thermophilus LMG 18311	55.375	99.032	0.548
amiF	Streptococcus salivarius strain HSISS4	55.049	99.032	0.545