Detailed information NTG1127557

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FGL06_RS01710
• Genome accession: NZ_LR594042
• Coordinates: 322390..323322 (+)
• Length: 310 a.a.
• NCBI ID: WP_138083563.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain NCTC8133
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 317390..328322

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL06_RS01690 (NCTC8133_00336)	-	317611..319263 (+)	1653	WP_126437599.1	peptide ABC transporter substrate-binding protein	-
FGL06_RS01695 (NCTC8133_00337)	-	319375..320289 (+)	915	WP_021141673.1	ABC transporter permease	-
FGL06_RS01700 (NCTC8133_00338)	-	320301..321332 (+)	1032	WP_126437600.1	ABC transporter permease	-
FGL06_RS01705 (NCTC8133_00339)	oppD	321344..322390 (+)	1047	WP_024344767.1	ABC transporter ATP-binding protein	Regulator
FGL06_RS01710 (NCTC8133_00340)	amiF	322390..323322 (+)	933	WP_138083563.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35016.77 Da
• Isoelectric Point: 5.6347

>NTDB_id=1127557 FGL06_RS01710 WP_138083563.1 322390..323322(+) (amiF) [Streptococcus equinus strain NCTC8133]
MTENRKKLVELKNVSLTFNEGKKNEVKAINNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINGGEIDFDGETVSNL
KGKELHEFRKNVQMIFQDPQASLNGRMKIHDIVAEGLDIHKLVNSKEERDEKVQELLSLVGLNKDHMTRYPHEFSGGQRQ
RIGIARALAVQPKFIIADEPISALDVSIQAQVVNLMQKLQRERGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNNPIHPYTKSLLSAIPEPDPESERGRVHQVYDPTAELDGQEREMREITPGHFVLSTEAEAEEYKKALQ

Nucleotide

• Length: 933 bp

>NTDB_id=1127557 FGL06_RS01710 WP_138083563.1 322390..323322(+) (amiF) [Streptococcus equinus strain NCTC8133]
ATGACTGAAAATAGAAAAAAGCTTGTTGAACTTAAAAATGTATCTTTGACCTTCAACGAAGGTAAAAAGAACGAAGTAAA
AGCAATCAACAACGTTAGCTTTGACATCTACGAAGGTGAGGTATTTGGTCTAGTTGGTGAATCAGGTTCTGGTAAAACAA
CTGTTGGACGTGCTATCTTGAAACTTTATGATATCAATGGTGGAGAAATTGATTTTGATGGTGAAACAGTTTCTAACCTT
AAAGGTAAAGAATTGCACGAATTCCGTAAAAATGTCCAAATGATTTTCCAAGACCCTCAAGCAAGTCTTAATGGTCGTAT
GAAAATTCATGACATTGTTGCAGAAGGTCTTGATATTCATAAATTAGTTAATAGTAAAGAAGAACGTGATGAAAAAGTTC
AAGAATTACTATCATTAGTTGGTTTGAACAAAGATCACATGACTCGTTATCCACATGAATTTTCAGGTGGTCAACGTCAA
CGTATTGGTATTGCTCGAGCACTTGCAGTTCAACCAAAATTTATCATTGCTGATGAACCAATTTCAGCCCTTGACGTATC
AATCCAAGCTCAAGTTGTAAACTTGATGCAAAAACTTCAACGTGAACGCGGCTTAACATACTTATTCATCGCTCACGATT
TGTCTATGGTGAAATACATTTCAGACCGTATCGGTGTTATGCACTGGGGAAAAATGCTTGAAATTGGAACATCTGATGAT
GTTTACAATAATCCAATCCACCCATACACTAAGAGTCTGTTGTCTGCTATTCCTGAACCAGACCCAGAATCTGAACGTGG
ACGTGTACACCAAGTGTATGATCCTACTGCAGAGCTTGATGGCCAAGAACGTGAAATGCGAGAAATTACTCCAGGACACT
TTGTACTTTCAACAGAAGCAGAAGCAGAAGAATACAAAAAAGCATTACAATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	56.25	98.065	0.552
amiF	Streptococcus thermophilus LMG 18311	55.921	98.065	0.548
amiF	Streptococcus salivarius strain HSISS4	55.592	98.065	0.545