Detailed information NTG0112755

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: LG36_RS09645
• Genome accession: NZ_CP009472
• Coordinates: 2025101..2027440 (-)
• Length: 779 a.a.
• NCBI ID: WP_038602028.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain AI06
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2020101..2032440

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG36_RS09605 (LG36_1844)	-	2021016..2021522 (-)	507	WP_012898444.1	Asp23/Gls24 family envelope stress response protein	-
LG36_RS09610 (LG36_1845)	-	2021543..2021731 (-)	189	WP_012898445.1	DUF2273 domain-containing protein	-
LG36_RS09615 (LG36_1846)	amaP	2021742..2022302 (-)	561	WP_038602014.1	alkaline shock response membrane anchor protein AmaP	-
LG36_RS09620 (LG36_1847)	-	2022330..2022572 (-)	243	WP_038602017.1	GlsB/YeaQ/YmgE family stress response membrane protein	-
LG36_RS09625 (LG36_1848)	fmt	2022748..2023707 (-)	960	WP_038602020.1	methionyl-tRNA formyltransferase	-
LG36_RS09630 (LG36_1849)	-	2023704..2024168 (-)	465	WP_003131474.1	VOC family protein	-
LG36_RS09635 (LG36_1850)	-	2024134..2024655 (-)	522	WP_038602023.1	NUDIX hydrolase	-
LG36_RS09640 (LG36_1851)	-	2024668..2025042 (-)	375	WP_038602026.1	nuclear transport factor 2 family protein	-
LG36_RS09645 (LG36_1852)	priA	2025101..2027440 (-)	2340	WP_038602028.1	primosomal protein N'	Machinery gene
LG36_RS09650 (LG36_1853)	rpoZ	2027578..2027931 (-)	354	WP_038602031.1	DNA-directed RNA polymerase subunit omega	-
LG36_RS09655 (LG36_1854)	gmk	2028112..2028729 (-)	618	WP_003131468.1	guanylate kinase	-
LG36_RS09660 (LG36_1855)	rny	2028876..2030471 (-)	1596	WP_003131467.1	ribonuclease Y	-
LG36_RS09665 (LG36_1856)	-	2030702..2031415 (-)	714	WP_038602035.1	glucosamine-6-phosphate deaminase	-

Sequence

Protein

• Length: 779 a.a.
• Molecular weight: 88929.22 Da
• Isoelectric Point: 6.4762

>NTDB_id=112755 LG36_RS09645 WP_038602028.1 2025101..2027440(-) (priA) [Lactococcus lactis strain AI06]
MKIAKVIVDVPLMQTDKPFSYSLSAEFENLIEVGMRVHVPFGSGNRLVQGIVIGFEDEELEPSVNLKGISELLDVEPVLT
DEQLWLADEMRHSVFSYKISCLKAMLPNLLNSNYDKLLKSTDGTSVKWSQMTEAEKISSAKAVRLGQLSVEYLAKSKENR
KTEKFLSIPDIEKLAEFEIEKRAKKRLELKYFLLRLQEEKIAVKSLNFSSQIIKFFVEHDLVKIEEVEISRTKEKFEDVE
NDSAKILNSEQNAAYEKIIASSDKPFLLEGITGSGKTEVYLQTIDHFLKLGKTAIMLVPEISLTPQITNRFIARFGDKVA
IMHSGLSDGEKYDEWRKIKSGKAQVVVGARSAIFAPVENLGIIIIDEEHETSYKQDSSPRYHARDIALLRAKWHGARLVL
GSATPSLETRARAMRGVYELLLLTKRANEAAILPEIKIIDMRSEISDQSANFSQSLLTKIKEKIDKDEQVILMLNRRGYS
SFVLCRECGFVVDCPNCDISLTLHMDTRTLNCHYCGHVEGIPQTCPNCHSRQIRYYGSGTQKVEEELREIMPEARVLRMD
VDTTRTKNAHEKILEKFGNHEADILLGTQMIAKGLDFPNVTLVGVINADTGLNLPDFRASERSFELLMQVAGRAGRADKK
GEVLIQTFNPHHYAIEMTKAQDYEKFYEMEMRFRRELSYPPYYFTVQVLVSHQDEEVAIQKSYEIAQLLKQNLTEKAKIL
GPTARPIARTHNLYHYQILVKYRFEEELESALNQVLELTQLRDNKNLRVLIDSEPQNFV

Nucleotide

• Length: 2340 bp

>NTDB_id=112755 LG36_RS09645 WP_038602028.1 2025101..2027440(-) (priA) [Lactococcus lactis strain AI06]
ATGAAAATTGCTAAAGTCATCGTTGATGTACCTCTGATGCAGACGGATAAACCCTTTTCTTACAGCCTTTCAGCTGAATT
TGAAAATTTGATTGAAGTGGGCATGCGGGTTCATGTTCCTTTTGGAAGTGGAAACCGGCTTGTCCAAGGAATCGTCATTG
GATTTGAAGATGAAGAACTTGAGCCGTCAGTAAATTTGAAAGGAATTTCTGAACTACTTGACGTTGAGCCAGTCCTAACG
GATGAACAGCTTTGGTTGGCAGATGAAATGCGTCATTCAGTATTTTCTTATAAAATTTCATGTCTAAAAGCCATGTTACC
TAATCTTTTGAATTCTAATTATGACAAGCTCCTAAAATCGACTGACGGAACTTCTGTCAAATGGTCACAAATGACAGAAG
CAGAAAAAATCTCGTCAGCAAAGGCTGTACGTTTGGGTCAGCTGTCAGTAGAATATTTAGCAAAATCTAAAGAAAATAGA
AAAACAGAAAAATTCTTATCTATTCCAGATATCGAAAAACTAGCTGAATTTGAAATTGAAAAGAGAGCTAAAAAACGCTT
AGAGTTGAAATATTTTCTATTACGACTTCAAGAAGAAAAAATTGCTGTCAAATCATTAAATTTTTCTTCACAAATCATTA
AATTTTTCGTTGAGCATGACCTAGTCAAAATTGAAGAAGTTGAAATTTCGAGGACGAAAGAAAAATTTGAAGATGTGGAA
AATGACAGTGCTAAAATTCTCAACTCCGAACAAAATGCAGCTTACGAAAAAATAATTGCATCTTCTGACAAACCATTTTT
GTTGGAAGGAATTACTGGTTCAGGTAAAACAGAAGTTTACTTACAGACCATTGACCATTTTCTCAAACTCGGTAAAACAG
CAATTATGCTTGTGCCAGAAATTTCTTTGACGCCACAGATTACTAATCGATTTATTGCTCGTTTTGGAGATAAAGTGGCG
ATTATGCATTCTGGTTTATCTGATGGTGAAAAATATGATGAATGGCGAAAAATTAAATCTGGCAAAGCTCAGGTAGTTGT
CGGTGCACGTTCAGCTATTTTTGCACCTGTTGAAAATTTGGGAATTATCATCATTGATGAAGAACATGAAACTTCATATA
AGCAAGATTCAAGTCCCCGTTATCATGCAAGAGATATTGCGCTTTTGCGTGCAAAATGGCATGGTGCAAGACTTGTTTTA
GGTTCTGCTACGCCAAGTTTAGAAACGCGAGCACGTGCCATGCGCGGCGTTTATGAACTTTTATTACTGACAAAAAGGGC
AAATGAAGCAGCAATCCTGCCAGAAATAAAAATCATTGATATGCGCAGTGAAATTTCTGACCAATCTGCTAATTTCTCAC
AATCTTTACTGACAAAAATAAAAGAAAAAATTGACAAAGATGAACAAGTCATTTTGATGTTGAATCGAAGGGGTTATTCT
TCATTTGTCCTGTGCCGCGAATGTGGTTTTGTTGTTGATTGTCCTAATTGCGATATTTCCTTGACCCTTCACATGGATAC
CCGAACTTTGAATTGTCATTATTGTGGTCATGTCGAAGGAATTCCGCAAACTTGTCCCAATTGTCATTCGCGACAAATTC
GTTATTACGGTTCAGGAACGCAAAAAGTCGAAGAAGAACTTCGAGAAATTATGCCTGAAGCACGAGTTTTGCGAATGGAT
GTAGATACGACTCGGACAAAAAATGCTCATGAAAAAATTCTTGAAAAATTTGGTAATCATGAAGCTGATATCCTCTTAGG
AACTCAGATGATTGCCAAAGGTTTAGATTTTCCAAACGTAACCTTAGTGGGTGTCATTAACGCAGATACTGGCCTAAATC
TACCTGATTTTAGAGCGAGTGAGCGTTCCTTTGAATTGTTGATGCAGGTGGCTGGACGAGCTGGACGAGCAGATAAAAAA
GGTGAAGTATTAATTCAAACTTTCAATCCACATCATTACGCCATTGAAATGACCAAGGCTCAAGATTACGAAAAATTTTA
TGAAATGGAAATGAGATTTCGTCGTGAACTTTCCTATCCGCCTTATTATTTCACCGTTCAAGTGCTTGTTTCTCATCAAG
ATGAAGAAGTTGCCATTCAAAAATCTTATGAGATTGCTCAATTACTCAAGCAAAATTTGACAGAAAAAGCTAAAATTTTA
GGGCCAACCGCTAGACCAATTGCCAGAACACATAACCTTTATCATTATCAAATCTTAGTTAAATATCGTTTTGAAGAAGA
ATTAGAATCAGCTTTGAATCAAGTGCTTGAATTAACCCAACTTCGGGATAACAAAAATTTACGAGTATTGATTGATAGTG
AGCCACAAAATTTTGTATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (562-637)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (5-107)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (494-518)

• Type III restriction enzyme, res subunit (ResIII) (247-405)

• Primosomal protein N C-terminal domain (PriA_C) (681-775)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	47.512	100	0.49