Detailed information NTG1127262

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FGL00_RS09710
• Genome accession: NZ_LR594034
• Coordinates: 1942850..1943782 (-)
• Length: 310 a.a.
• NCBI ID: WP_065361139.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1937850..1948782

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL00_RS09685 (NCTC8546_01998)	tsaD	1938339..1939355 (-)	1017	WP_138084041.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
FGL00_RS09690 (NCTC8546_01999)	rimI	1939345..1939770 (-)	426	WP_138098746.1	ribosomal protein S18-alanine N-acetyltransferase	-
FGL00_RS09695 (NCTC8546_02000)	tsaB	1939772..1940470 (-)	699	WP_138084042.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
FGL00_RS09700 (NCTC8546_02001)	-	1940756..1940986 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
FGL00_RS09705 (NCTC8546_02002)	rnjA	1940988..1942670 (+)	1683	WP_003056700.1	ribonuclease J1	-
FGL00_RS09710 (NCTC8546_02003)	amiF	1942850..1943782 (-)	933	WP_065361139.1	ATP-binding cassette domain-containing protein	Regulator
FGL00_RS09715 (NCTC8546_02004)	oppD	1943775..1944827 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
FGL00_RS09720 (NCTC8546_02005)	-	1944839..1945870 (-)	1032	WP_138084043.1	ABC transporter permease	-
FGL00_RS09725 (NCTC8546_02006)	-	1945880..1946794 (-)	915	WP_003052794.1	ABC transporter permease	-
FGL00_RS09730 (NCTC8546_02007)	-	1947062..1948717 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35159.01 Da
• Isoelectric Point: 6.7863

>NTDB_id=1127262 FGL00_RS09710 WP_065361139.1 1942850..1943782(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPAKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=1127262 FGL00_RS09710 WP_065361139.1 1942850..1943782(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGCCAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526