Detailed information NTG1127164

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FGK99_RS01475
• Genome accession: NZ_LR594033
• Coordinates: 294497..295432 (+)
• Length: 311 a.a.
• NCBI ID: WP_138118745.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC4675
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 289497..300432

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK99_RS01455 (NCTC4675_00299)	-	289658..291316 (+)	1659	WP_138118743.1	peptide ABC transporter substrate-binding protein	-
FGK99_RS01460 (NCTC4675_00300)	-	291483..292397 (+)	915	WP_012514937.1	ABC transporter permease	-
FGK99_RS01465 (NCTC4675_00301)	-	292407..293438 (+)	1032	WP_012678545.1	ABC transporter permease	-
FGK99_RS01470 (NCTC4675_00302)	oppD	293451..294497 (+)	1047	WP_012678544.1	ABC transporter ATP-binding protein	Regulator
FGK99_RS01475 (NCTC4675_00303)	amiF	294497..295432 (+)	936	WP_138118745.1	ABC transporter ATP-binding protein	Regulator
FGK99_RS01480 (NCTC4675_00304)	rnjA	296081..297763 (-)	1683	WP_012514941.1	ribonuclease J1	-
FGK99_RS01485 (NCTC4675_00305)	-	297765..297995 (-)	231	WP_014622279.1	DNA-dependent RNA polymerase subunit epsilon	-
FGK99_RS01490 (NCTC4675_00306)	tsaB	298281..298979 (+)	699	WP_138118747.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
FGK99_RS01495 (NCTC4675_00307)	rimI	298982..299407 (+)	426	WP_043030444.1	ribosomal protein S18-alanine N-acetyltransferase	-
FGK99_RS01500 (NCTC4675_00308)	tsaD	299397..300413 (+)	1017	WP_012678539.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35043.11 Da
• Isoelectric Point: 8.3839

>NTDB_id=1127164 FGK99_RS01475 WP_138118745.1 294497..295432(+) (amiF) [Streptococcus equi subsp. zooepidemicus strain NCTC4675]
MTEARKKLIEVKNVSLTFNKGKKNEVKAIDRLSFDIYEGEVFGLVGESGSGKTTAGRAILKLYDISDGEIIFNGENVSQL
KGKKLHSFRKHAQMIFQDPQASLNGRMKIRDIVAEGLDIHSLTASKAEREARVQELLKLVGLNQDHLTRYPHEFSGGQRQ
RIGIARALAVKPTFIIADEPISALDVSIQAQVVSLMQQLQKKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDE
VYNHPIHPYTKSLISAIPEPDPEKERRRIAEVYDPSQELDGQERQMHEITPGHFVLATQAEADQYRAERGL

Nucleotide

• Length: 936 bp

>NTDB_id=1127164 FGK99_RS01475 WP_138118745.1 294497..295432(+) (amiF) [Streptococcus equi subsp. zooepidemicus strain NCTC4675]
ATGACAGAAGCTCGTAAAAAATTAATCGAAGTAAAGAATGTTTCCTTAACCTTTAACAAAGGGAAGAAAAACGAGGTTAA
GGCTATTGATCGCCTTAGCTTTGACATTTATGAGGGGGAAGTATTTGGCCTTGTTGGGGAATCAGGCTCAGGCAAGACAA
CAGCTGGTCGAGCTATTTTGAAATTGTATGATATTAGTGATGGTGAGATTATTTTTAATGGAGAAAATGTCTCCCAATTA
AAAGGGAAAAAGCTGCATAGCTTTCGTAAGCATGCGCAAATGATCTTCCAAGATCCTCAGGCTAGTCTGAACGGTCGCAT
GAAAATCAGAGACATTGTTGCAGAGGGCTTAGACATTCATAGCTTGACAGCCTCAAAGGCAGAGCGTGAGGCAAGAGTCC
AAGAGCTATTAAAGCTTGTTGGACTCAATCAGGATCATTTGACGCGGTACCCACATGAATTTTCCGGTGGCCAACGCCAG
CGGATTGGCATTGCGCGTGCCCTGGCTGTGAAGCCGACCTTTATTATCGCAGATGAGCCGATTTCAGCACTTGATGTGTC
GATTCAAGCACAGGTAGTGAGTCTTATGCAGCAATTGCAAAAGAAGCGTGGCTTGACCTATCTCTTTATCGCACACGATT
TGTCTATGGTCAAATACATTTCAGACCGTATTGGTGTGATGCATTGGGGCAAAATGCTTGAGATTGGAACATCTGATGAG
GTTTACAATCACCCGATTCACCCTTATACGAAAAGCTTGATCTCGGCCATTCCTGAGCCGGATCCTGAAAAGGAGCGTAG
GCGCATTGCAGAGGTTTATGATCCTAGTCAAGAGCTAGATGGCCAAGAGCGGCAAATGCATGAAATCACTCCTGGGCATT
TTGTCTTAGCGACGCAGGCCGAAGCCGATCAGTACCGAGCAGAGCGTGGCCTCTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-269)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	53.922	98.392	0.531
amiF	Streptococcus thermophilus LMG 18311	53.595	98.392	0.527
amiF	Streptococcus salivarius strain HSISS4	53.268	98.392	0.524