Detailed information NTG1127126

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FGK95_RS08915
• Genome accession: NZ_LR590625
• Coordinates: 1782672..1783604 (-)
• Length: 310 a.a.
• NCBI ID: WP_138114307.1
• Uniprot ID: -
• Organism: Streptococcus canis strain B700072
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1777672..1788604

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK95_RS08890 (SAMEA5186854_01792)	tsaD	1778159..1779175 (-)	1017	WP_093999469.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
FGK95_RS08895 (SAMEA5186854_01793)	rimI	1779165..1779590 (-)	426	WP_093999470.1	ribosomal protein S18-alanine N-acetyltransferase	-
FGK95_RS08900 (SAMEA5186854_01794)	tsaB	1779592..1780290 (-)	699	WP_093999471.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
FGK95_RS08905 (SAMEA5186854_01795)	-	1780575..1780805 (+)	231	WP_003045256.1	DNA-dependent RNA polymerase subunit epsilon	-
FGK95_RS08910 (SAMEA5186854_01796)	rnjA	1780807..1782489 (+)	1683	WP_003045259.1	ribonuclease J1	-
FGK95_RS08915 (SAMEA5186854_01797)	amiF	1782672..1783604 (-)	933	WP_138114307.1	ABC transporter ATP-binding protein	Regulator
FGK95_RS08920 (SAMEA5186854_01798)	oppD	1783601..1784650 (-)	1050	WP_093999473.1	ABC transporter ATP-binding protein	Regulator
FGK95_RS08925 (SAMEA5186854_01799)	-	1784662..1785693 (-)	1032	WP_093999474.1	ABC transporter permease	-
FGK95_RS08930 (SAMEA5186854_01800)	-	1785703..1786617 (-)	915	WP_138114388.1	ABC transporter permease	-
FGK95_RS11015	-	1786855..1787298 (+)	444	Protein_1678	transposase	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35168.04 Da
• Isoelectric Point: 6.9395

>NTDB_id=1127126 FGK95_RS08915 WP_138114307.1 1782672..1783604(-) (amiF) [Streptococcus canis strain B700072]
MNDNRKKIVALKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDISEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTTSKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKCLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITSGHFVLATQEEADHYRRDYR

Nucleotide

• Length: 933 bp

>NTDB_id=1127126 FGK95_RS08915 WP_138114307.1 1782672..1783604(-) (amiF) [Streptococcus canis strain B700072]
ATGAATGACAATCGAAAAAAAATAGTAGCCTTAAAAAATGTCTCCCTAACCTTCAATAAAGGCAAGAAAAACGAAGTTAA
GGCTATTGATAACGTTAGTTTTGATATTTATGAAGGCGAAGTCTTTGGACTGGTGGGGGAATCAGGGTCAGGGAAAACAA
CAGTTGGCCGTGCGATTCTGAAACTTTATGATATTAGTGAAGGAGAAATCATTTTTAATGGTGAAACTGTTTCTCACCTG
AAAGGGAAAGACTTGCGGACCTTCCGTAAGGATGCCCAAATGATTTTCCAAGACCCTCAGGCCAGTCTCAATGGTCGTAT
GAAAATTAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGCCTGACAACTTCAAAAGCAGAGCGAGAAGAGCGGGTGC
AAGAACTCCTTGACTTGGTTGGATTGAATAAGGACCATTTAACCCGTTACCCGCATGAATTTTCAGGAGGGCAACGTCAG
CGGATTGGCATTGCCCGCGCTTTGGCGGTTAAACCTAAGTTTATCATTGCTGACGAACCGATCTCAGCTCTCGATGTGTC
CATTCAGGCACAGGTGGTTAATTTGATGCAAAAACTTCAGCACAAACGTGGCTTGACCTATCTCTTTATTGCTCATGACT
TGTCCATGGTTAAATACATTTCTGACCGTATTGGCGTCATGCATTGGGGCAAAATGTTGGAGATTGGGACATCAGATGAT
GTTTACAATCATCCCATTCACCCCTACACCAAGTGTCTGCTTTCGGCTATTCCTGAGCCAGATCCTGATAAAGAACGGCA
ACGTGTGGCTGATGTTTACGACCCTAGTCAAGAATTGGACGGTCAGGAGCGCCAAATGCACGAAATTACCTCAGGGCATT
TTGTTTTAGCTACCCAAGAAGAAGCTGACCATTATCGACGTGACTATCGTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-270)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	52.787	98.387	0.519
amiF	Streptococcus thermophilus LMG 18311	52.459	98.387	0.516
amiF	Streptococcus salivarius strain HSISS4	52.131	98.387	0.513