Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | FGK95_RS00870 | Genome accession | NZ_LR590625 |
| Coordinates | 142822..143775 (+) | Length | 317 a.a. |
| NCBI ID | WP_003046195.1 | Uniprot ID | A0AAE4Q9T5 |
| Organism | Streptococcus canis strain B700072 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 137822..148775
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGK95_RS00830 (SAMEA5186854_00169) | - | 138648..139013 (+) | 366 | WP_003046179.1 | DUF1033 family protein | - |
| FGK95_RS00835 (SAMEA5186854_00170) | comYA | 139100..140041 (+) | 942 | WP_003046182.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FGK95_RS00840 (SAMEA5186854_00171) | comYB | 139974..141008 (+) | 1035 | WP_223824829.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| FGK95_RS00845 (SAMEA5186854_00172) | comGC/cglC | 141011..141337 (+) | 327 | WP_003046186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FGK95_RS00850 (SAMEA5186854_00173) | comGD | 141312..141740 (+) | 429 | WP_039994748.1 | competence type IV pilus minor pilin ComGD | - |
| FGK95_RS00855 (SAMEA5186854_00174) | comGE | 141718..141993 (+) | 276 | WP_003046190.1 | competence type IV pilus minor pilin ComGE | - |
| FGK95_RS00860 (SAMEA5186854_00175) | comGF | 141974..142414 (+) | 441 | WP_003046192.1 | competence type IV pilus minor pilin ComGF | - |
| FGK95_RS00865 (SAMEA5186854_00176) | comGG | 142392..142772 (+) | 381 | WP_003046193.1 | competence type IV pilus minor pilin ComGG | - |
| FGK95_RS00870 (SAMEA5186854_00177) | comYH | 142822..143775 (+) | 954 | WP_003046195.1 | class I SAM-dependent methyltransferase | Machinery gene |
| FGK95_RS00875 (SAMEA5186854_00178) | - | 143834..145030 (+) | 1197 | WP_093998734.1 | acetate kinase | - |
| FGK95_RS00880 (SAMEA5186854_00179) | - | 145322..145528 (+) | 207 | WP_003046200.1 | helix-turn-helix transcriptional regulator | - |
| FGK95_RS10705 (SAMEA5186854_00180) | - | 145686..146123 (+) | 438 | WP_138114014.1 | hypothetical protein | - |
| FGK95_RS00895 (SAMEA5186854_00181) | proC | 146263..147039 (-) | 777 | WP_093998733.1 | pyrroline-5-carboxylate reductase | - |
| FGK95_RS00900 (SAMEA5186854_00182) | pepA | 147087..148154 (-) | 1068 | WP_093998732.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35915.02 Da Isoelectric Point: 4.7866
>NTDB_id=1127086 FGK95_RS00870 WP_003046195.1 142822..143775(+) (comYH) [Streptococcus canis strain B700072]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNIDKLKALCLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDTIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEVMDSS
AHFIQEDAVRPQLLKESDVVISDLPVGYYPNDAIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKHWLKGYAQVVALITLPDTIFGHPSNAKSIIVLQKQTDRPMETFVYPIRDLKLAENIHALMDNFKKWKLDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNIDKLKALCLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDTIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEVMDSS
AHFIQEDAVRPQLLKESDVVISDLPVGYYPNDAIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKHWLKGYAQVVALITLPDTIFGHPSNAKSIIVLQKQTDRPMETFVYPIRDLKLAENIHALMDNFKKWKLDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=1127086 FGK95_RS00870 WP_003046195.1 142822..143775(+) (comYH) [Streptococcus canis strain B700072]
ATGAATTTTGAAAAAATTGAAGAAGCTTATCAGTTGCTTTTAGAGAATAGCCAACTGATTGAAAATGACTTAAAAACCCA
TATTTATGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCAGAGGGAGCCAGTCCTCAGGTGGCTCAAAACATTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGCAGAGCCTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAACAACTGCAAGCCAACCATCAGTTCACACCAGATACTATTGGTTTTATTCTTCTCTATCTGTTGGAACAATTGAGCGA
CAAAGATAGCTTGGAGGTGCTTGAAATTGGGAGTGGAACAGGGAACCTAGCTCAAACCCTTCTCAACAACACGAGCAAGT
CTCTTGATTATGTAGGAATTGAACTTGATGATCTCTTGATTGATTTGTCAGCCAGCATTGCAGAGGTGATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCAGTAAGACCTCAATTATTGAAAGAAAGTGATGTTGTCATCAGTGACTTGCCAGTTGG
CTATTATCCTAACGATGCTATTGCCAAACGTTACAAGGTGGCTAGTTCAGATGAGCATACGTATGCTCACCATTTATTAA
TGGAACAGTCTCTAAAATACTTGAAAAAAGATGGCTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACATTGGTTAAAAGGATATGCTCAGGTGGTGGCTCTAATTACTCTACCAGACACCATTTTTGGTCA
TCCATCCAATGCCAAGTCTATTATTGTCTTGCAAAAACAAACAGACCGCCCAATGGAAACCTTTGTTTATCCAATTCGGG
ACTTGAAACTTGCAGAGAATATTCATGCTCTTATGGATAATTTTAAAAAGTGGAAACTGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCTTATCAGTTGCTTTTAGAGAATAGCCAACTGATTGAAAATGACTTAAAAACCCA
TATTTATGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCAGAGGGAGCCAGTCCTCAGGTGGCTCAAAACATTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGCAGAGCCTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAACAACTGCAAGCCAACCATCAGTTCACACCAGATACTATTGGTTTTATTCTTCTCTATCTGTTGGAACAATTGAGCGA
CAAAGATAGCTTGGAGGTGCTTGAAATTGGGAGTGGAACAGGGAACCTAGCTCAAACCCTTCTCAACAACACGAGCAAGT
CTCTTGATTATGTAGGAATTGAACTTGATGATCTCTTGATTGATTTGTCAGCCAGCATTGCAGAGGTGATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCAGTAAGACCTCAATTATTGAAAGAAAGTGATGTTGTCATCAGTGACTTGCCAGTTGG
CTATTATCCTAACGATGCTATTGCCAAACGTTACAAGGTGGCTAGTTCAGATGAGCATACGTATGCTCACCATTTATTAA
TGGAACAGTCTCTAAAATACTTGAAAAAAGATGGCTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACATTGGTTAAAAGGATATGCTCAGGTGGTGGCTCTAATTACTCTACCAGACACCATTTTTGGTCA
TCCATCCAATGCCAAGTCTATTATTGTCTTGCAAAAACAAACAGACCGCCCAATGGAAACCTTTGTTTATCCAATTCGGG
ACTTGAAACTTGCAGAGAATATTCATGCTCTTATGGATAATTTTAAAAAGTGGAAACTGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.772 |
99.685 |
0.666 |
| comYH | Streptococcus mutans UA159 |
66.456 |
99.685 |
0.662 |