Detailed information NTG1126876

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: FGK94_RS05610
• Genome accession: NZ_LR590471
• Coordinates: 1224908..1225861 (-)
• Length: 317 a.a.
• NCBI ID: WP_043029264.1
• Uniprot ID: A0AAX2LGX9
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC11854
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	1225946..1227288	1224908..1225861	flank	85

Gene organization within MGE regions

Location: 1224908..1227288

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK94_RS05610 (NCTC11854_01152)	comYH	1224908..1225861 (-)	954	WP_043029264.1	class I SAM-dependent methyltransferase	Machinery gene

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35726.72 Da
• Isoelectric Point: 4.6973

>NTDB_id=1126876 FGK94_RS05610 WP_043029264.1 1224908..1225861(-) (comYH) [Streptococcus equi subsp. zooepidemicus strain NCTC11854]
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAQTILNHSHKSIDYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPIRDLKSVDNVRDFMENFKNWKRDNVI

Nucleotide

• Length: 954 bp

>NTDB_id=1126876 FGK94_RS05610 WP_043029264.1 1224908..1225861(-) (comYH) [Streptococcus equi subsp. zooepidemicus strain NCTC11854]
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATTTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGCCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGCTAACCAAGGAGGAGTGGCGTCAGGCTTACCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGTTTTATCATGCTTTATATTTTGGAGACCTTGAGTTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGAACAGGTAATTTAGCTCAAACTATTTTAAACCACTCACATAAGA
GCATTGATTATTTAGGCATTGAGCTTGATGATTTATTAATTGATCTATCAGCTAGTATTGCTGAAATCATGGGGTCGTCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAGGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAACAGGCCTTAAAGTACCTGAAAAAAGATGGTTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGCAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGGG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (68-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA159	63.608	99.685	0.634
comYH	Streptococcus mutans UA140	63.608	99.685	0.634