Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   EL236_RS06515 Genome accession   NZ_LR134502
Coordinates   1274933..1275448 (-) Length   171 a.a.
NCBI ID   WP_052794242.1    Uniprot ID   A0AAN3QXH2
Organism   Campylobacter jejuni strain NCTC13257     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1269933..1280448
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL236_RS06500 (NCTC13257_01306) - 1270036..1271853 (-) 1818 WP_126393833.1 motility associated factor glycosyltransferase family protein -
  EL236_RS06505 (NCTC13257_01307) - 1271850..1273673 (-) 1824 WP_126393835.1 motility associated factor glycosyltransferase family protein -
  EL236_RS06510 (NCTC13257_01308) - 1273683..1274933 (-) 1251 WP_126624084.1 DUF2920 family protein -
  EL236_RS06515 (NCTC13257_01309) ctsG 1274933..1275448 (-) 516 WP_052794242.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  EL236_RS06520 (NCTC13257_01310) tsaD 1275449..1276456 (-) 1008 WP_052861639.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  EL236_RS06525 (NCTC13257_01311) - 1276453..1277847 (-) 1395 WP_052861642.1 M99 family carboxypeptidase catalytic domain-containing protein -
  EL236_RS06530 (NCTC13257_01312) dxr 1277849..1278919 (-) 1071 WP_052821042.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  EL236_RS06535 (NCTC13257_01313) cdsA 1278916..1279641 (-) 726 WP_052861644.1 phosphatidate cytidylyltransferase -
  EL236_RS06540 (NCTC13257_01314) - 1279650..1279988 (-) 339 WP_022552380.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18650.51 Da        Isoelectric Point: 6.4693

>NTDB_id=1123440 EL236_RS06515 WP_052794242.1 1274933..1275448(-) (ctsG) [Campylobacter jejuni strain NCTC13257]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVNFRVGDEKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=1123440 EL236_RS06515 WP_052794242.1 1274933..1275448(-) (ctsG) [Campylobacter jejuni strain NCTC13257]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGCACAAAAGAAGTAAATTTTCGCGTAGGCGATGAGAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment