Detailed information NTG1123101

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: EL241_RS07260
• Genome accession: NZ_LR134483
• Coordinates: 1490929..1493316 (-)
• Length: 795 a.a.
• NCBI ID: WP_036103951.1
• Uniprot ID: -
• Organism: Listeria grayi strain NCTC 10812
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1485929..1498316

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL241_RS07240 (NCTC10812_01488)	-	1486138..1486593 (-)	456	WP_170166149.1	VOC family protein	-
EL241_RS07245 (NCTC10812_01489)	-	1486673..1487608 (+)	936	WP_036103964.1	YafY family protein	-
EL241_RS07250 (NCTC10812_01490)	-	1487651..1490314 (-)	2664	WP_036103958.1	YhgE/Pip family protein	-
EL241_RS07255 (NCTC10812_01491)	-	1490333..1490806 (-)	474	WP_036103954.1	Rrf2 family transcriptional regulator	-
EL241_RS07260 (NCTC10812_01492)	recD2	1490929..1493316 (-)	2388	WP_036103951.1	ATP-dependent RecD-like DNA helicase	Machinery gene
EL241_RS07265 (NCTC10812_01493)	-	1493328..1493999 (-)	672	WP_036104446.1	tetratricopeptide repeat protein	-
EL241_RS07270 (NCTC10812_01494)	mnmA	1494147..1495262 (-)	1116	WP_036103948.1	tRNA 2-thiouridine(34) synthase MnmA	-
EL241_RS07275 (NCTC10812_01495)	-	1495259..1496419 (-)	1161	WP_036103945.1	cysteine desulfurase family protein	-
EL241_RS07285 (NCTC10812_01497)	-	1496763..1498037 (-)	1275	WP_003755697.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 795 a.a.
• Molecular weight: 89849.78 Da
• Isoelectric Point: 4.8095

>NTDB_id=1123101 EL241_RS07260 WP_036103951.1 1490929..1493316(-) (recD2) [Listeria grayi strain NCTC 10812]
MEEQGSLLEQPEELFIKGTILSTIFHNADNLFSVVRLLVKDTNTNWDERDIVVTGYFPALHEEEVYLFYGKMKEHPKFGQ
QFHAERFQKEMPQSREGVISYLSGELFKGIGKVIAENIVDTLGKDAISRILADPSLLDNVPKLPEAKALTLIDTLRENQG
LEHVMVKLNEYGFGPQLSMRIYQAYKQDAIEVIEKNPYRLIEDVRGIGFQRADELGRKLGLSGAHPDRIRAGLLYTMDQI
SMQQGHVYMEEEPLIQEVIHLLQESEPVTISHEEVAKELLVLAEEQKLIRENTRIYLPSLYFAESGFAYHVKRMMKQTEY
AEQFPESEFLLALGELEERLQVSFGETQKEAIKQALMSPMLALTGGPGTGKTTVIKGIVELFAELHGLSLDPHAYKDGAA
FPILLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQENLDDESERSIDGRLLIVDEMSMVDVWLANQLFRALPAHMQVIL
VGDQDQLPSVGPGQVLKDILESKQLPTVELTDIYRQKDGSSIIEMAHAIKEGQLPPDFTKNSADRSFFHCQVGQISDVVE
QVVKNAKAKGFRAKDIQVLAPMYRGPAGIDILNRQLQEIFNPNDTGKRKEVAFGDIKYRIHDKVLQLVNQPEKNVFNGDI
GEIVSIIYAKENTEKQDMIVVEFDQTEVTYYRQEFTQITHAYCCSIHKAQGSEFPIVIMPVVKSYYRMLRRDLLYTAVTR
SSQFLIICGEEEAFRAGVERINEHTRNTTLYDRLVSEDVLLDETSSLKVLTMTNVEEIDPMIGMEGITPEQFASA

Nucleotide

• Length: 2388 bp

>NTDB_id=1123101 EL241_RS07260 WP_036103951.1 1490929..1493316(-) (recD2) [Listeria grayi strain NCTC 10812]
ATGGAAGAACAAGGCTCTTTATTAGAACAGCCAGAAGAATTATTTATTAAAGGGACTATTTTATCCACGATCTTCCATAA
TGCTGATAACTTGTTTTCTGTCGTTCGTTTGCTAGTAAAAGATACGAACACGAATTGGGATGAACGGGACATCGTCGTTA
CCGGTTATTTCCCAGCCTTACATGAAGAAGAAGTATATCTGTTTTACGGAAAAATGAAGGAGCACCCGAAATTCGGGCAG
CAGTTTCATGCCGAGCGTTTTCAAAAAGAAATGCCGCAATCACGGGAAGGCGTCATCAGCTACTTATCTGGAGAGCTATT
TAAGGGTATCGGCAAGGTTATTGCGGAAAACATCGTTGATACACTTGGAAAAGACGCGATCAGTAGGATCTTAGCGGATC
CCTCGCTGCTGGATAATGTCCCGAAACTACCAGAAGCAAAAGCGCTGACATTGATCGATACACTTCGGGAAAATCAAGGT
CTGGAACATGTCATGGTCAAACTCAATGAATATGGGTTTGGACCTCAGCTATCCATGCGTATCTATCAAGCTTATAAACA
AGATGCGATCGAGGTGATCGAAAAAAATCCTTACCGGTTGATTGAAGATGTTCGTGGGATCGGATTTCAGCGTGCCGATG
AACTGGGGCGTAAGCTCGGTTTAAGTGGTGCGCATCCTGATCGTATTCGCGCAGGTTTGCTTTATACAATGGATCAGATC
AGTATGCAACAAGGGCATGTCTATATGGAAGAAGAGCCGCTTATCCAAGAAGTGATCCATTTGCTCCAAGAAAGTGAACC
GGTAACGATCTCGCATGAGGAAGTAGCAAAGGAACTGCTTGTCTTAGCAGAGGAACAAAAATTGATAAGGGAAAACACAC
GGATCTATCTACCTTCTCTCTATTTTGCGGAAAGCGGTTTTGCCTACCATGTGAAGCGAATGATGAAACAAACGGAATAT
GCAGAGCAGTTTCCAGAATCAGAATTTTTGTTAGCGCTCGGAGAACTAGAGGAGCGCTTGCAGGTTTCCTTTGGAGAAAC
GCAGAAAGAAGCGATCAAACAAGCGCTGATGTCACCGATGCTGGCACTTACAGGTGGTCCGGGTACGGGGAAAACAACGG
TTATCAAAGGGATCGTCGAACTATTTGCGGAACTCCATGGCCTTAGCTTAGATCCGCATGCCTATAAAGATGGCGCGGCT
TTTCCTATCCTGCTTGCAGCCCCAACTGGCAGAGCGGCTAAACGAATGTCGGAATCGACTGGACTTCCGGCGATGACGAT
CCACCGTTTGCTTGGCATGAATGGGCAAGAGAACTTGGATGATGAATCGGAACGCTCTATCGATGGACGCTTGCTTATCG
TGGACGAAATGTCGATGGTCGATGTGTGGCTGGCGAACCAGCTCTTTCGCGCACTTCCTGCGCATATGCAAGTTATCTTG
GTAGGCGATCAGGATCAATTGCCGTCAGTCGGTCCAGGTCAAGTGCTGAAAGATATCCTTGAATCGAAACAGCTCCCAAC
AGTGGAACTGACTGATATTTACCGCCAAAAGGATGGCTCTTCGATCATTGAAATGGCGCATGCAATCAAAGAGGGACAAT
TACCTCCGGATTTTACGAAAAACAGCGCAGACCGCTCTTTCTTTCATTGCCAAGTTGGTCAAATCAGTGACGTCGTAGAA
CAAGTGGTCAAAAATGCCAAAGCAAAGGGATTCCGGGCGAAGGACATTCAAGTTCTGGCACCGATGTACCGCGGTCCAGC
CGGGATCGATATTTTGAATCGCCAACTGCAGGAAATTTTTAATCCAAATGATACGGGTAAGCGTAAAGAAGTTGCTTTCG
GCGATATCAAATATCGGATACATGATAAAGTGCTTCAACTTGTCAATCAGCCGGAAAAGAATGTTTTTAATGGTGATATC
GGCGAAATCGTCTCGATTATTTATGCAAAAGAAAATACAGAAAAACAAGATATGATCGTTGTGGAATTCGATCAGACCGA
AGTGACGTATTATCGGCAGGAATTCACGCAGATCACGCATGCGTATTGTTGTTCGATCCATAAAGCGCAAGGGAGTGAAT
TCCCGATCGTCATCATGCCGGTCGTGAAAAGCTATTACCGGATGCTACGACGCGACCTCTTGTATACAGCCGTTACAAGA
AGTAGTCAGTTTTTGATTATATGCGGCGAAGAAGAAGCTTTTCGAGCTGGTGTCGAACGAATCAATGAGCATACACGCAA
TACCACGTTATATGACAGACTTGTGAGCGAAGATGTGTTGCTCGATGAAACAAGCAGTTTGAAAGTCCTGACCATGACAA
ATGTGGAAGAAATCGATCCGATGATCGGAATGGAAGGAATAACGCCGGAGCAATTCGCGAGCGCATGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (346-550)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (592-663)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	58.113	100	0.581