Detailed information NTG1122348

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: EL158_RS02150
• Genome accession: NZ_LR134372
• Coordinates: 427122..427856 (+)
• Length: 244 a.a.
• NCBI ID: WP_034956206.1
• Uniprot ID: A0A3S4SSA3
• Organism: Campylobacter upsaliensis strain NCTC11541
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 422122..432856

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL158_RS02130 (NCTC11541_00443)	-	422766..423491 (+)	726	WP_027304761.1	GNAT family N-acetyltransferase	-
EL158_RS02135 (NCTC11541_00444)	lon	423548..425923 (-)	2376	WP_027304760.1	endopeptidase La	-
EL158_RS02140 (NCTC11541_00445)	-	425946..426593 (-)	648	WP_027304759.1	outer membrane protein assembly factor BamD	-
EL158_RS02145 (NCTC11541_00446)	fliW	426733..427122 (+)	390	WP_004276902.1	flagellar assembly protein FliW	-
EL158_RS02150 (NCTC11541_00447)	proC	427122..427856 (+)	735	WP_034956206.1	pyrroline-5-carboxylate reductase	Machinery gene
EL158_RS02155 (NCTC11541_00448)	-	427853..428167 (+)	315	WP_004276904.1	type II secretion system protein	-
EL158_RS02160 (NCTC11541_00449)	-	428151..428825 (+)	675	WP_027304757.1	type II secretion system protein J	-
EL158_RS02165 (NCTC11541_00450)	-	428822..429274 (+)	453	WP_004276906.1	hypothetical protein	-
EL158_RS02170 (NCTC11541_00451)	rpsR	429283..429543 (-)	261	WP_004274960.1	30S ribosomal protein S18	-
EL158_RS02175 (NCTC11541_00452)	-	429556..430053 (-)	498	WP_004276907.1	single-stranded DNA-binding protein	-
EL158_RS02180 (NCTC11541_00453)	rpsF	430062..430439 (-)	378	WP_027304756.1	30S ribosomal protein S6	-
EL158_RS02185 (NCTC11541_00454)	rseP	430537..431643 (-)	1107	WP_027304755.1	RIP metalloprotease RseP	-
EL158_RS02190 (NCTC11541_00455)	pgsA	431640..432170 (-)	531	WP_027304754.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 244 a.a.
• Molecular weight: 26882.39 Da
• Isoelectric Point: 7.7240

>NTDB_id=1122348 EL158_RS02150 WP_034956206.1 427122..427856(+) (proC) [Campylobacter upsaliensis strain NCTC11541]
MSSIYILANGAMASALAYGLRDFYEIYIVGREAQKLEYLKKEGFKTLLYNEFDLENKNVILAFKPYALNEMSQILKGEAR
ILISVLASTSLKELECIRAQNIARIMPNIAAKYKASTTPFILKNELFKEEIVQILTSFGNAYELSSEKQMPSAMALSGCA
PAFLSLVAEALANGGVYRGLDKELSLKLTQGLFESFSTLLAHEHPALIKESVCSPAGVSIKGVKVLEERAIRAAFMEAVY
ISSK

Nucleotide

• Length: 735 bp

>NTDB_id=1122348 EL158_RS02150 WP_034956206.1 427122..427856(+) (proC) [Campylobacter upsaliensis strain NCTC11541]
ATGTCCAGCATTTATATCCTTGCAAATGGTGCTATGGCGAGTGCCTTAGCTTATGGTTTAAGAGATTTTTATGAAATTTA
TATAGTGGGGCGTGAAGCTCAAAAACTTGAATATTTGAAAAAAGAAGGCTTTAAAACTTTACTTTACAACGAATTTGACT
TGGAAAATAAAAATGTTATCTTGGCTTTTAAGCCTTATGCTTTAAATGAAATGTCCCAAATTTTAAAGGGGGAAGCGAGG
ATTTTAATTTCCGTTTTGGCAAGTACTAGTTTGAAAGAATTAGAGTGTATTAGAGCTCAAAATATTGCGAGGATTATGCC
AAATATCGCTGCTAAATATAAAGCCTCTACCACACCTTTTATATTAAAAAACGAGCTTTTTAAAGAAGAAATAGTCCAAA
TTTTAACAAGTTTTGGTAATGCTTATGAATTGAGTAGCGAAAAACAAATGCCAAGTGCTATGGCTTTAAGTGGCTGTGCG
CCCGCTTTTCTTTCTTTGGTGGCTGAAGCTCTTGCAAATGGTGGTGTGTATAGAGGTTTAGATAAGGAGTTAAGTTTAAA
GCTTACGCAAGGGCTTTTTGAAAGCTTTTCGACACTTTTAGCTCACGAGCACCCAGCTCTTATCAAAGAAAGTGTTTGCT
CACCTGCTGGTGTGAGCATAAAAGGCGTGAAGGTGTTAGAAGAAAGGGCTATTAGAGCGGCATTTATGGAGGCTGTTTAT
ATCAGCTCCAAATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-87)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (147-239)

3D structure

• AlphaFold DB: A0A3S4SSA3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	65.417	98.361	0.643