Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   EL245_RS02925 Genome accession   NZ_LR134350
Coordinates   693526..695289 (-) Length   587 a.a.
NCBI ID   WP_126381787.1    Uniprot ID   A0A448HES0
Organism   Actinomyces howellii strain NCTC11636     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 688526..700289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL245_RS02905 (NCTC11636_00580) - 688769..690064 (-) 1296 WP_126381783.1 hemolysin family protein -
  EL245_RS02910 (NCTC11636_00581) ybeY 690061..690519 (-) 459 WP_126381784.1 rRNA maturation RNase YbeY -
  EL245_RS02915 (NCTC11636_00582) - 690516..691628 (-) 1113 WP_232009916.1 PhoH family protein -
  EL245_RS13555 (NCTC11636_00583) - 691537..691770 (+) 234 WP_232009972.1 hypothetical protein -
  EL245_RS02920 (NCTC11636_00584) - 691728..693533 (-) 1806 WP_126381786.1 ABC transporter ATP-binding protein -
  EL245_RS02925 (NCTC11636_00585) rcrP 693526..695289 (-) 1764 WP_126381787.1 ABC transporter ATP-binding protein Regulator
  EL245_RS02930 (NCTC11636_00586) - 695411..695899 (-) 489 WP_126381788.1 MarR family winged helix-turn-helix transcriptional regulator -
  EL245_RS02935 (NCTC11636_00587) - 696269..696913 (-) 645 WP_126381789.1 DNA-3-methyladenine glycosylase I -
  EL245_RS02940 (NCTC11636_00588) - 696910..697458 (-) 549 WP_126381790.1 methylated-DNA--[protein]-cysteine S-methyltransferase -
  EL245_RS02945 (NCTC11636_00589) - 697570..698316 (-) 747 WP_126381791.1 ABC transporter permease -
  EL245_RS02950 (NCTC11636_00590) - 698313..698990 (-) 678 WP_237585275.1 ABC transporter ATP-binding protein -
  EL245_RS02955 (NCTC11636_00591) - 699333..699938 (-) 606 WP_126381792.1 TetR/AcrR family transcriptional regulator -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 62985.60 Da        Isoelectric Point: 7.4392

>NTDB_id=1122115 EL245_RS02925 WP_126381787.1 693526..695289(-) (rcrP) [Actinomyces howellii strain NCTC11636]
MITALSYLSRRERGMVALTLVLIVVQVWLDLLLPDYMSRITTLVQTEGSQMSEVLTQGGWMLACALGSMASSVVVGYLAA
HVAAGLARTLRTAVFEHSLGFSTAEVSRFTAASLINRATNDITQIQNVVAMGLQAVVKAPILAVWAVLKVAGKSWQWSAA
TAVAVLVLCIMLTVILTVAVPRFRRIQGLTDVLNRVTREHLTGIRVVRAYNAEAYQEAAFGRANDDITRTNLTANRVMAV
MNPGMSLISAGLTLSVYTIGAHLINDAGQPERLGLFADMVVFSNYAMQVIMAFMLLTMVFILLPRAQVAATRVLEVIKTV
PAVADPASTAAPPARSGTIVLEKVSFRYPGAAADALTDVSLSAAPGQTVAIIGATGAGKTTLVDLVPRFQDATSGRVLVD
GVDVRDYSLEDLRSRIGYVPQRSYLFAGTIASNVDYPGQGADPQARERVVRAVATAQSTDFVEAKEDGYDAEVTQGGTNL
SGGQRQRLSIARALAAEPEILIFDDSFSALDYATDRALRQALAQRSPRATTLVVAQRIGTIRHADRIVVLEAGRVVGQGT
HDELLETCPTYQAIARSQLTEEELRHA

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=1122115 EL245_RS02925 WP_126381787.1 693526..695289(-) (rcrP) [Actinomyces howellii strain NCTC11636]
ATGATCACAGCGCTGTCCTACCTCAGCCGCCGGGAGCGGGGGATGGTCGCCCTCACCCTGGTTCTTATCGTCGTCCAGGT
CTGGCTCGACCTGCTCCTGCCCGACTACATGTCCCGGATCACGACGCTCGTCCAGACCGAGGGCTCCCAGATGAGCGAGG
TCCTCACCCAGGGCGGCTGGATGCTCGCCTGCGCCCTGGGCTCGATGGCCTCGAGCGTCGTCGTGGGCTACCTCGCCGCG
CACGTGGCCGCGGGACTGGCCCGCACCCTGCGCACCGCCGTCTTCGAGCACTCCCTGGGCTTCTCGACCGCCGAGGTCTC
CCGCTTCACGGCGGCCAGCCTCATCAACAGGGCGACCAACGACATCACCCAGATCCAGAACGTCGTCGCCATGGGCCTAC
AGGCAGTCGTCAAGGCCCCGATCCTCGCGGTGTGGGCCGTGCTCAAGGTCGCGGGCAAGAGCTGGCAGTGGTCCGCGGCG
ACCGCGGTGGCCGTCCTCGTCCTGTGCATCATGCTCACCGTCATCCTCACCGTCGCCGTGCCCCGTTTCCGCAGGATCCA
GGGACTGACCGACGTGCTCAACCGCGTGACCCGCGAGCACCTGACCGGGATCCGCGTCGTGCGCGCCTACAACGCCGAGG
CCTACCAGGAGGCGGCCTTCGGGAGGGCCAACGACGACATCACGAGGACCAACCTGACCGCCAACCGGGTCATGGCCGTC
ATGAACCCCGGGATGAGCCTCATCAGCGCGGGACTGACCCTGTCGGTCTACACCATCGGCGCCCACCTCATCAACGACGC
CGGTCAGCCCGAGCGCCTGGGCCTGTTCGCCGACATGGTCGTCTTCTCCAACTACGCCATGCAGGTCATCATGGCATTCA
TGCTCCTGACCATGGTCTTCATCCTGCTGCCCCGCGCGCAGGTGGCGGCCACCCGGGTCCTGGAGGTCATCAAGACCGTT
CCCGCCGTCGCCGACCCCGCCTCGACGGCCGCCCCGCCGGCGCGCAGCGGCACCATCGTCCTGGAGAAGGTCTCCTTCCG
CTATCCCGGCGCCGCCGCCGACGCCCTGACCGACGTGTCCCTGAGCGCCGCCCCCGGCCAGACCGTCGCGATCATCGGCG
CCACCGGCGCGGGCAAGACGACCCTCGTCGACCTCGTCCCCCGCTTCCAGGACGCGACCTCGGGACGGGTGCTCGTCGAC
GGCGTCGACGTGCGCGACTACAGCCTGGAGGACCTGCGCTCCCGGATCGGCTACGTCCCCCAGCGCTCCTACCTCTTCGC
CGGCACCATCGCCTCCAACGTCGACTACCCGGGCCAGGGGGCCGACCCCCAGGCGCGCGAGAGGGTCGTGCGGGCCGTGG
CCACGGCCCAGTCCACCGACTTCGTCGAGGCCAAGGAGGACGGCTACGACGCCGAGGTGACCCAGGGCGGCACGAACCTG
TCAGGAGGCCAGCGCCAGCGGCTGTCCATCGCCCGTGCGCTGGCGGCCGAGCCGGAGATCCTCATCTTCGACGACTCCTT
CTCGGCACTGGACTACGCCACCGACCGCGCCCTGCGCCAGGCCCTGGCACAGCGCTCGCCACGTGCCACGACCCTCGTGG
TCGCCCAACGCATCGGCACGATCCGGCACGCCGACCGCATCGTCGTGCTCGAAGCGGGACGGGTCGTGGGTCAGGGCACC
CACGACGAGCTGCTCGAGACCTGCCCGACCTACCAGGCGATCGCCCGATCCCAGCTCACCGAGGAGGAGCTGCGCCATGC
CTGA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(18-293)

ABC transporter (ABC_tran)

(356-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A448HES0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

49.75

100

0.508

Multiple sequence alignment