Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   EL092_RS08745 Genome accession   NZ_LR134291
Coordinates   1817943..1819709 (-) Length   588 a.a.
NCBI ID   WP_012130788.1    Uniprot ID   A8AZ11
Organism   Streptococcus gordonii strain NCTC7868     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1812943..1824709
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL092_RS08730 (NCTC7868_01744) - 1813035..1814648 (-) 1614 WP_012130785.1 CTP synthase -
  EL092_RS08735 (NCTC7868_01745) manA 1815088..1816032 (-) 945 WP_012130786.1 mannose-6-phosphate isomerase, class I -
  EL092_RS08740 (NCTC7868_01746) rcrQ 1816196..1817953 (-) 1758 WP_012130787.1 ABC transporter ATP-binding protein Regulator
  EL092_RS08745 (NCTC7868_01747) rcrP 1817943..1819709 (-) 1767 WP_012130788.1 ABC transporter ATP-binding protein Regulator
  EL092_RS08750 (NCTC7868_01748) - 1819702..1820160 (-) 459 WP_012130789.1 MarR family winged helix-turn-helix transcriptional regulator -
  EL092_RS08755 (NCTC7868_01749) - 1820432..1821001 (-) 570 WP_012130790.1 hypothetical protein -
  EL092_RS08760 (NCTC7868_01750) - 1821011..1821421 (-) 411 WP_012130791.1 peptide deformylase -
  EL092_RS08765 (NCTC7868_01751) scrK 1821470..1822369 (-) 900 WP_012130792.1 fructokinase ScrK -
  EL092_RS08770 (NCTC7868_01752) - 1822610..1823134 (-) 525 WP_012130793.1 hypothetical protein -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 64886.17 Da        Isoelectric Point: 5.4497

>NTDB_id=1120382 EL092_RS08745 WP_012130788.1 1817943..1819709(-) (rcrP) [Streptococcus gordonii strain NCTC7868]
MFKLFKRLTSKEIGLILMTVVFICLTVYLELEVPTYMSEITTLLQTPGTTTGDLWVPGLKMLGLSFASLFSLVIAGFVSS
RMASSYTTRLREDIFNRVLDYSNSEIKKFSIPSLLTRTTNDITQIQVFIAMGLQVVIRGSIMAIWAMTKVVGKSDAWLIA
VLVAVAAIILMTIVLVTLAFPKQSIVQTLTDKLNSVTRESLTGIRVVRAYNAEDYQDAKFGAANDEVTSLNIFINRFMSL
FNPIMSGISSGLTLAIYWIGAYLIHSAASADKLGLFSDMVVFMSYGMQVVIGFLLMGALFIVLPRTLVSAGRINKVLALD
SSIKEKDQAQTEGQSKGQVTFEDVSFRYAKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLVNLIPRFYDVTEGRILVD
GVDVRDYELKALRNKVGYIPQKAVLFSGTIASNLDFGESMETPLDEEKMWEALELAQAKSFVEEKEAGLESEVSQGGTNY
SGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRKELAEQTQHMTKLIVAQRISTIMDADQILVLDNGKVVGQGT
HKELLATNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=1120382 EL092_RS08745 WP_012130788.1 1817943..1819709(-) (rcrP) [Streptococcus gordonii strain NCTC7868]
ATGTTTAAATTATTTAAACGCTTGACGTCAAAAGAAATCGGACTGATTTTGATGACAGTTGTTTTTATCTGTCTGACCGT
TTATTTAGAGTTGGAAGTGCCAACTTATATGTCGGAAATTACAACCTTACTACAGACACCGGGGACAACGACAGGAGATC
TATGGGTGCCAGGTTTGAAAATGCTAGGCCTATCCTTTGCCAGCTTATTCTCCTTGGTAATAGCTGGTTTTGTGTCCTCT
CGGATGGCTTCTAGCTATACTACCCGCTTGCGCGAGGATATTTTTAATCGTGTTTTGGATTATTCTAATTCAGAGATTAA
AAAATTCTCTATCCCAAGTCTTCTGACCAGAACAACCAACGATATTACCCAAATTCAGGTGTTTATCGCTATGGGATTAC
AAGTTGTTATCCGAGGAAGCATCATGGCGATTTGGGCTATGACGAAGGTTGTTGGCAAATCAGATGCTTGGTTGATCGCT
GTTTTAGTCGCGGTTGCAGCCATTATATTAATGACGATTGTCTTAGTGACTTTGGCTTTTCCAAAGCAATCTATTGTACA
AACCTTGACTGATAAGTTAAATAGTGTGACACGTGAGAGTTTGACAGGGATTCGGGTTGTTCGGGCCTATAATGCAGAAG
ATTACCAGGATGCAAAATTTGGTGCAGCAAACGACGAGGTAACTAGCCTTAATATTTTTATTAACCGCTTCATGTCTTTG
TTCAATCCGATTATGAGCGGAATTTCAAGTGGTTTAACGCTGGCTATTTATTGGATTGGAGCTTATTTGATTCATAGCGC
AGCATCTGCTGATAAGCTTGGTCTATTCAGTGATATGGTTGTTTTCATGTCTTATGGTATGCAGGTTGTAATTGGCTTCT
TGCTGATGGGGGCTTTATTTATTGTTTTACCACGTACCCTTGTTTCGGCTGGACGGATTAACAAAGTGTTAGCACTGGAT
AGCAGTATCAAAGAAAAAGATCAAGCACAGACTGAGGGCCAAAGTAAAGGACAAGTAACTTTTGAAGATGTTTCTTTCCG
TTATGCAAAAAATTCTGAAGCAGTAATTGAGCATGTTAGTTTCACTGCTAAAGCTGGTGAAACAGTTGCCTTTATTGGAT
CTACTGGTTCAGGTAAATCAACCCTTGTCAATTTGATACCTCGTTTCTATGATGTGACAGAAGGTAGGATTCTAGTCGAT
GGTGTAGATGTCCGTGACTACGAGCTTAAAGCTCTACGTAATAAGGTAGGGTATATTCCGCAGAAAGCTGTACTTTTCTC
AGGGACAATTGCTTCAAATTTGGACTTTGGAGAAAGCATGGAAACTCCACTAGATGAAGAGAAAATGTGGGAAGCCCTTG
AACTAGCACAAGCCAAATCATTTGTAGAAGAAAAAGAGGCAGGGCTTGAGTCTGAAGTGTCTCAAGGAGGCACCAACTAT
TCTGGTGGTCAACGCCAACGTCTGGCTATTGCGCGTGCATTGGCCCGTAAGCCGGAAATTTTGATATTTGATGATTCTTT
CTCTGCTTTGGACTATAAGACAGATCGTATATTACGAAAAGAATTGGCAGAACAGACCCAACATATGACAAAACTGATTG
TCGCCCAACGAATTTCCACTATTATGGATGCCGATCAAATCCTAGTTCTAGACAATGGTAAAGTCGTTGGACAAGGTACC
CATAAAGAGTTGTTGGCTACGAATGAAGTGTACCAAGAAATTGCTTATTCTCAATTATCAAAGGAGGAACTAGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(54-285)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AZ11

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

69.167

100

0.706

Multiple sequence alignment