Detailed information NTG1120092

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: EL070_RS01450
• Genome accession: NZ_LR134284
• Coordinates: 265808..266731 (+)
• Length: 307 a.a.
• NCBI ID: WP_111705452.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC8232
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 260808..271731

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL070_RS01435 (NCTC8232_00286)	amiC	262308..263810 (+)	1503	WP_011017334.1	ABC transporter permease	Regulator
EL070_RS01440 (NCTC8232_00287)	amiD	263810..264736 (+)	927	WP_002986004.1	oligopeptide ABC transporter permease OppC	Regulator
EL070_RS01445 (NCTC8232_00288)	amiE	264745..265815 (+)	1071	WP_010921893.1	ABC transporter ATP-binding protein	Regulator
EL070_RS01450 (NCTC8232_00289)	amiF	265808..266731 (+)	924	WP_111705452.1	ABC transporter ATP-binding protein	Regulator
EL070_RS10460	-	266769..266858 (-)	90	WP_110002794.1	IS3 family transposase	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34714.96 Da
• Isoelectric Point: 6.9302

>NTDB_id=1120092 EL070_RS01450 WP_111705452.1 265808..266731(+) (amiF) [Streptococcus pyogenes strain NCTC8232]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELVVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKKL

Nucleotide

• Length: 924 bp

>NTDB_id=1120092 EL070_RS01450 WP_111705452.1 265808..266731(+) (amiF) [Streptococcus pyogenes strain NCTC8232]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAATCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGTTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAATCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGAGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCACATGAATTTTCAGGAGGTCAACGTCAGCGGATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAACCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTTTTAAACCTTCTCAAACGGATGCAAGCCGAAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAAAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.026	99.674	0.818
amiF	Streptococcus thermophilus LMD-9	81.699	99.674	0.814
amiF	Streptococcus salivarius strain HSISS4	81.699	99.674	0.814