Detailed information NTG1119775

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: EL077_RS08485
• Genome accession: NZ_LR134273
• Coordinates: 1794085..1795008 (-)
• Length: 307 a.a.
• NCBI ID: WP_126437052.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. equi strain NCTC12091
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1789085..1800008

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL077_RS08485 (NCTC12091_01720)	amiF	1794085..1795008 (-)	924	WP_126437052.1	ATP-binding cassette domain-containing protein	Regulator
EL077_RS08490 (NCTC12091_01721)	amiE	1795001..1796071 (-)	1071	WP_012516279.1	ABC transporter ATP-binding protein	Regulator
EL077_RS08495 (NCTC12091_01722)	amiD	1796080..1797006 (-)	927	WP_043031408.1	oligopeptide ABC transporter permease OppC	Regulator
EL077_RS08500 (NCTC12091_01723)	amiC	1797006..1798505 (-)	1500	WP_014623463.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34686.89 Da
• Isoelectric Point: 6.9308

>NTDB_id=1119775 EL077_RS08485 WP_126437052.1 1794085..1795008(-) (amiF) [Streptococcus equi subsp. equi strain NCTC12091]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNETSSGEIRYDGKIINGKKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEDERKEKIKQMMSEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMDPEFVIADEPISALDVSVRAQVLNLLKKIQSEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFV
NPVHPYTKSLLSAVPIPDPILERQKKLVVYHPEQHDYSVDKPSMVEIKPNHFVWANQAEAERYRKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1119775 EL077_RS08485 WP_126437052.1 1794085..1795008(-) (amiF) [Streptococcus equi subsp. equi strain NCTC12091]
ATGTCTGAAAAATTAGTTGAAGTAAAAGACCTGGAGATTTCCTTTGGAGAGGGAAAGAAAAAGTTTGTTGCCGTTAAAAA
TGCCAATTTCTTTATCAATAAAGGAGAAACCTTTTCTCTTGTTGGAGAATCAGGCAGCGGAAAGACAACAATAGGTCGTG
CTATCATTGGCTTAAATGAAACAAGCTCAGGCGAAATCCGCTACGACGGTAAGATTATTAATGGTAAAAAATCAAAATCT
GAAGCTAATGAACTGATTAGAAAAATCCAAATGATTTTTCAAGACCCAGCAGCCAGCCTGAATGAGCGTGCAACGGTTGA
TTATATCATCTCAGAAGGCCTTTATAATTTTAACCTATTCAAGACAGAAGATGAACGTAAAGAAAAAATTAAACAGATGA
TGTCAGAGGTGGGCTTGCTTGCAGAGCACCTGACACGCTACCCACATGAGTTTTCAGGTGGGCAGCGTCAGCGTATAGGC
ATTGCAAGAGCACTTGTGATGGATCCAGAGTTTGTCATTGCTGATGAGCCAATTTCAGCTCTTGATGTATCTGTTCGTGC
CCAAGTCTTGAATCTGTTGAAGAAAATACAGTCTGAAAAAGGCTTGACCTATTTATTCATTGCTCATGATTTATCGGTTG
TGCGTTTTATTTCAGATCGTATTGCTGTTATTCACAAAGGAGTAATTGTTGAAGTTGCTGAAACAGAAGAGCTTTTTGTT
AATCCTGTTCACCCTTATACCAAATCTCTGTTGTCAGCGGTACCAATTCCAGATCCCATTTTAGAGCGTCAAAAGAAATT
GGTGGTCTATCATCCAGAGCAGCATGACTATTCTGTTGACAAGCCATCAATGGTGGAAATCAAACCAAATCACTTCGTCT
GGGCTAACCAGGCAGAAGCGGAGCGTTACCGTAAAGAGCTTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	83.007	99.674	0.827
amiF	Streptococcus thermophilus LMD-9	82.68	99.674	0.824
amiF	Streptococcus salivarius strain HSISS4	82.68	99.674	0.824