Detailed information NTG1119471

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: EL095_RS06165
• Genome accession: NZ_LR134264
• Coordinates: 1325672..1328086 (+)
• Length: 804 a.a.
• NCBI ID: WP_126498021.1
• Uniprot ID: -
• Organism: Staphylococcus simulans strain NCTC7944
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1320672..1333086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL095_RS06140 (SAMEA3500277_01260)	-	1321151..1321357 (+)	207	WP_002481109.1	CsbD family protein	-
EL095_RS06145 (SAMEA3500277_01261)	-	1321455..1322459 (-)	1005	WP_002481108.1	LLM class flavin-dependent oxidoreductase	-
EL095_RS06150 (SAMEA3500277_01262)	-	1322642..1323784 (+)	1143	WP_103363652.1	cysteine desulfurase family protein	-
EL095_RS06155 (SAMEA3500277_01263)	mnmA	1323787..1324899 (+)	1113	WP_002481106.1	tRNA 2-thiouridine(34) synthase MnmA	-
EL095_RS06160 (SAMEA3500277_01264)	-	1325001..1325669 (+)	669	WP_002481105.1	tetratricopeptide repeat protein	-
EL095_RS06165 (SAMEA3500277_01265)	recD2	1325672..1328086 (+)	2415	WP_126498021.1	ATP-dependent RecD-like DNA helicase	Machinery gene
EL095_RS06170 (SAMEA3500277_01267)	alaS	1328397..1331027 (+)	2631	WP_126498022.1	alanine--tRNA ligase	-
EL095_RS06175 (SAMEA3500277_01268)	-	1331096..1331359 (+)	264	WP_103363654.1	IreB family regulatory phosphoprotein	-
EL095_RS06180 (SAMEA3500277_01269)	ruvX	1331363..1331788 (+)	426	WP_002481101.1	Holliday junction resolvase RuvX	-
EL095_RS06185 (SAMEA3500277_01270)	-	1331813..1332124 (+)	312	WP_002481100.1	DUF1292 domain-containing protein	-
EL095_RS06190 (SAMEA3500277_01271)	-	1332367..1333008 (+)	642	WP_103363655.1	O-methyltransferase	-

Sequence

Protein

• Length: 804 a.a.
• Molecular weight: 90547.89 Da
• Isoelectric Point: 4.5138

>NTDB_id=1119471 EL095_RS06165 WP_126498021.1 1325672..1328086(+) (recD2) [Staphylococcus simulans strain NCTC7944]
MENPTLFDYSMVKGTVEAILFQNKDNFYTVLKVDPIETNEDFDNMPTIVGFFPEIAEGDVYTFKGQAVTHPRYGKQLKAE
TFEKEVPQTKDAIISYLSSDLFKGVGKKTAENIVNTLGENTINKILDDRSVLEEVPNLSKKKQSQIADQIYSNQEVEKIM
IRLHDLGFGPKLAMSIYQVYQSDTLQTIEKNPYDLVYDVRGVGFHKADTLAKNLGIEYNAPERLKAGLLYTIEEECIKQG
HTFLPKDYVLETSLEMLSKGYDQTIDASMLEKVILELTEESKLVEADETLSIPSLYYSEVKSVQNLYRIASHQAKLENIE
QSDLQINIGEIEEMNGVNYASSQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYAETHGLSLSYDDYQEDDYPIALA
APTGRAAKRLQESTGLEAMTIHRLIGWSQDTKPEDVLENEITAKLIIIDELSMVDTWLFHQFLNAVPIDAQIILVGDEDQ
LPSVGPGQVFKDLIDAKVIPRVNLTEVYRQQDGSSIIELAHKMKLGQPIDITERFHDRSFIPCTAEQIPDVVNKVVSSAV
KKGYDMSDIQVLAPMYRGSAGIKRLNKVLQDILNPKAEDAREIEFGEAVFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFW
ARENELNKDILVVDFEGNEITFTKQDMMELTHAYCTSIHKAQGSEFPIVIMPIVKQYYRMLQRPIIYTGLTRAKQSLVFL
GDSQAFDIGMKTHGQVRMTRLAQLLRDYFGHESETNEEQADEQINDQTTSAPAQQLVELTEATIYEIDPMIGMGKVTPYT
FNHE

Nucleotide

• Length: 2415 bp

>NTDB_id=1119471 EL095_RS06165 WP_126498021.1 1325672..1328086(+) (recD2) [Staphylococcus simulans strain NCTC7944]
TTGGAGAACCCTACATTGTTTGACTATTCGATGGTCAAAGGAACAGTAGAAGCAATCTTATTTCAAAATAAAGATAATTT
CTATACCGTATTAAAAGTAGATCCGATTGAAACCAATGAAGATTTTGATAATATGCCTACAATTGTGGGGTTCTTTCCTG
AAATTGCTGAAGGCGATGTTTATACCTTCAAAGGTCAAGCTGTGACACACCCTAGATACGGCAAACAATTAAAAGCTGAA
ACTTTCGAAAAAGAAGTACCGCAAACAAAAGATGCGATTATCAGTTACTTATCAAGTGATTTGTTTAAAGGTGTCGGTAA
GAAAACGGCTGAAAATATCGTAAATACACTTGGTGAAAATACCATCAATAAAATTTTAGATGATCGTTCAGTCCTAGAAG
AAGTACCGAATTTATCTAAAAAGAAACAAAGCCAAATCGCAGATCAAATCTACAGTAATCAAGAAGTAGAAAAAATTATG
ATCAGACTTCATGATTTAGGCTTCGGTCCGAAATTAGCGATGAGCATCTATCAAGTTTATCAAAGTGACACCTTACAAAC
GATAGAGAAAAATCCATATGATCTTGTCTATGATGTACGCGGTGTCGGTTTCCACAAAGCAGATACTTTAGCTAAGAATT
TAGGCATAGAATATAACGCCCCTGAACGCTTAAAAGCAGGTCTGCTTTATACGATAGAAGAAGAATGTATTAAACAAGGT
CATACATTTTTACCTAAAGATTATGTATTAGAAACTTCGTTAGAGATGTTAAGCAAGGGATATGACCAAACGATAGATGC
CAGTATGTTAGAAAAAGTGATACTTGAATTGACAGAAGAAAGTAAGTTGGTGGAAGCGGATGAAACACTTTCTATCCCAA
GCTTATATTATTCAGAAGTCAAAAGTGTGCAGAACCTGTATCGTATTGCGTCACATCAAGCTAAATTAGAGAATATTGAA
CAATCTGACTTACAAATCAATATTGGTGAAATCGAGGAAATGAATGGAGTCAACTACGCATCTTCTCAAAAAGAAGCACT
TGAAACAGCGATTAATTCAAAAGTCATGCTGCTGACAGGTGGTCCAGGTACCGGTAAAACAACGGTTATCAAAGGCATCG
TTGAACTCTATGCGGAAACGCATGGTTTATCCTTATCCTATGACGATTACCAAGAAGATGATTATCCGATAGCGCTTGCT
GCACCTACAGGACGTGCAGCCAAACGTTTACAAGAATCAACTGGACTTGAAGCAATGACCATCCATCGTTTAATCGGCTG
GAGTCAAGATACCAAGCCTGAAGATGTCTTAGAAAATGAAATTACTGCTAAGCTCATCATTATTGATGAATTGTCAATGG
TAGATACATGGTTGTTTCATCAGTTCTTGAATGCAGTACCGATTGATGCACAAATCATTTTAGTCGGAGATGAAGACCAA
TTACCATCAGTCGGCCCAGGACAAGTGTTTAAAGATTTAATTGATGCGAAAGTCATTCCACGTGTTAATTTAACTGAAGT
CTACCGTCAACAAGATGGTTCTAGTATCATTGAACTCGCACATAAAATGAAATTAGGTCAGCCGATAGACATTACTGAGC
GATTCCACGATCGCAGCTTTATTCCTTGTACAGCTGAACAAATACCAGATGTAGTCAATAAAGTGGTGAGTTCTGCTGTT
AAAAAAGGCTACGATATGAGCGATATTCAAGTCTTGGCTCCGATGTATCGCGGCAGTGCCGGCATTAAGCGTTTAAATAA
AGTATTACAAGATATCTTGAATCCTAAAGCTGAAGATGCAAGAGAGATTGAGTTCGGAGAAGCGGTCTTTAGAAAGGGCG
ACAAAGTCTTACAACTTGTGAATCGTCCTAATGATAATATTTTCAATGGTGATATCGGTGTGATTGTCGGTATCTTCTGG
GCACGTGAAAACGAATTAAATAAAGATATACTTGTCGTCGATTTTGAAGGTAATGAAATTACATTTACCAAACAAGATAT
GATGGAGTTAACACATGCTTATTGTACTTCCATTCATAAAGCACAAGGTTCAGAGTTTCCAATTGTTATTATGCCGATTG
TAAAACAATATTATCGCATGTTGCAGCGTCCGATTATCTATACAGGACTTACACGTGCCAAACAATCTTTAGTTTTTCTT
GGTGATAGCCAAGCCTTTGACATCGGTATGAAGACCCATGGGCAAGTACGTATGACGAGACTCGCACAATTGCTCAGAGA
TTACTTCGGTCATGAGAGTGAAACAAATGAAGAACAAGCAGATGAACAAATAAATGATCAAACAACCTCAGCACCTGCAC
AACAACTCGTAGAATTAACAGAAGCAACGATTTATGAAATTGACCCGATGATTGGTATGGGTAAGGTCACACCTTATACT
TTTAATCATGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• AAA domain (AAA_30) (339-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.937	99.378	0.496