Detailed information NTG1119442

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: EL101_RS06650
• Genome accession: NZ_LR134263
• Coordinates: 1399706..1402105 (+)
• Length: 799 a.a.
• NCBI ID: WP_096597093.1
• Uniprot ID: A0AAX0QTE1
• Organism: Staphylococcus delphini strain NCTC12225
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1394706..1407105

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL101_RS06625 (NCTC12225_01385)	-	1394879..1395064 (+)	186	WP_096541591.1	CsbD family protein	-
EL101_RS13265 (NCTC12225_01386)	-	1395101..1395262 (+)	162	WP_164715577.1	hypothetical protein	-
EL101_RS06630 (NCTC12225_01387)	-	1395529..1396542 (-)	1014	WP_096597095.1	LLM class flavin-dependent oxidoreductase	-
EL101_RS06635 (NCTC12225_01388)	-	1396756..1397901 (+)	1146	WP_096541681.1	cysteine desulfurase family protein	-
EL101_RS06640 (NCTC12225_01389)	mnmA	1397901..1399013 (+)	1113	WP_014613739.1	tRNA 2-thiouridine(34) synthase MnmA	-
EL101_RS06645 (NCTC12225_01390)	-	1399029..1399703 (+)	675	WP_096541587.1	tetratricopeptide repeat protein	-
EL101_RS06650 (NCTC12225_01391)	recD2	1399706..1402105 (+)	2400	WP_096597093.1	ATP-dependent RecD-like DNA helicase	Machinery gene
EL101_RS06655 (NCTC12225_01393)	alaS	1402351..1404984 (+)	2634	WP_096597091.1	alanine--tRNA ligase	-
EL101_RS06660 (NCTC12225_01394)	-	1405044..1405316 (+)	273	WP_096597089.1	IreB family regulatory phosphoprotein	-
EL101_RS06665 (NCTC12225_01395)	ruvX	1405309..1405737 (+)	429	WP_096541581.1	Holliday junction resolvase RuvX	-
EL101_RS06670 (NCTC12225_01396)	-	1405751..1406083 (+)	333	WP_096597087.1	DUF1292 domain-containing protein	-

Sequence

Protein

• Length: 799 a.a.
• Molecular weight: 90303.61 Da
• Isoelectric Point: 4.5957

>NTDB_id=1119442 EL101_RS06650 WP_096597093.1 1399706..1402105(+) (recD2) [Staphylococcus delphini strain NCTC12225]
MENPTLFDHTFIKGTVEMILFHNADNHYTVLKVEIEETNGDFDDMATVVGYFPNMVEDETYTFKGQVVQHARYGQQLKAE
TFQKEIPHTKDAVIAYLSSELFKGIGKKTAESIVNTLGENAIHDILKDESVIERVPKLSKAKQQQIVEQIYANQESEQVM
IRLNELGFGSKLAMDIYKFYKSDTLTVLDQNPYQLVYDIKGVGFNKADQLAQQLGIHPEHPDRLKAGLLYLVEETCIKQG
HTYLPQEALINETIQLLSQAKASSIDYDTMTQILAELVEEKRLVNQDEMVAIPSLYYSEIKSTQNLYKIFANREHLTTFD
ASDIQLHIGGIEEVNEVHYAPSQKEALEYAIRHKVMLLTGGPGTGKTTVIKGIVQLYAEIHGISLDYDDYSDEDDYPVVL
AAPTGRASKRLHEATGLEAMTIHRLIGWNQDTKPQDKLDNEIHAKLIIIDEMSMVDTWLFHQFMDAVPIDAQVVLVGDED
QLPSVGPGQVFKDLIDANVLPRINLTEVYRQQDGSSIIDLAHRMKLGEKVDITQRFHDRSFIPCQTDQIPQVVEKVVNNA
VQKGYTMADIQVLAPMYRGNAGIKKLNQILQDILNPLSDESQREIEFGDVLFRKGDKVLQLINRPNDNVFNGDIGVIVGI
FWAKENALNKDVVVVDYDGNEITYLRSDLTELTHAYCTSIHKAQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLV
FLGDADAFNIGLATAGQTRLTQLQTFLTQYFNPEDSEDEVDTDTDSAAFILTEATMFKIHPMINMGEVTPYDFLEIDKV

Nucleotide

• Length: 2400 bp

>NTDB_id=1119442 EL101_RS06650 WP_096597093.1 1399706..1402105(+) (recD2) [Staphylococcus delphini strain NCTC12225]
ATGGAAAATCCAACACTGTTTGACCATACATTTATTAAAGGCACCGTAGAAATGATTTTGTTTCATAATGCGGACAACCA
TTATACAGTGCTTAAAGTGGAAATTGAAGAAACAAATGGCGACTTTGATGATATGGCAACAGTGGTTGGATACTTTCCGA
ATATGGTAGAAGATGAGACGTACACTTTTAAAGGTCAAGTCGTGCAACATGCAAGATATGGTCAGCAATTAAAAGCAGAG
ACGTTTCAAAAAGAAATTCCTCATACCAAAGATGCCGTTATTGCGTATTTATCTAGTGAATTGTTTAAAGGGATTGGTAA
AAAAACGGCAGAATCCATTGTCAATACGTTAGGTGAAAATGCGATTCATGACATTTTGAAAGACGAATCTGTCATTGAAC
GGGTGCCTAAACTGTCTAAAGCGAAACAACAACAAATTGTCGAGCAGATTTATGCCAACCAAGAAAGTGAACAAGTGATG
ATTCGATTGAACGAACTGGGGTTTGGTTCAAAGCTTGCGATGGACATTTACAAGTTTTATAAAAGTGATACGTTAACGGT
ACTCGACCAAAATCCGTATCAACTTGTTTATGACATTAAAGGGGTTGGTTTTAACAAAGCTGACCAACTGGCCCAACAGC
TCGGTATTCATCCTGAGCATCCCGATCGTTTGAAAGCCGGATTACTTTATTTAGTTGAAGAGACGTGTATTAAACAAGGT
CATACGTACCTCCCACAAGAAGCGTTAATCAATGAAACGATTCAACTGCTGTCTCAAGCCAAAGCATCAAGTATCGACTA
TGACACCATGACGCAAATTTTGGCTGAATTAGTTGAAGAAAAGCGTCTAGTCAATCAAGATGAAATGGTGGCCATCCCAA
GTCTTTATTATTCGGAAATTAAAAGCACACAAAATTTATATAAAATATTTGCCAATCGCGAACATTTAACAACATTTGAT
GCGTCTGATATCCAATTACATATTGGGGGAATTGAAGAGGTCAATGAAGTGCATTATGCCCCTTCTCAAAAAGAGGCTTT
AGAATATGCTATCCGACATAAAGTTATGCTCCTCACGGGTGGACCAGGTACAGGAAAGACAACTGTCATTAAAGGGATTG
TCCAGTTATACGCAGAAATTCATGGCATCTCATTAGATTACGATGACTATTCAGATGAAGATGATTATCCGGTCGTATTA
GCTGCACCAACCGGAAGAGCGTCTAAACGTTTACATGAAGCAACAGGGTTAGAAGCAATGACGATTCACCGCTTAATAGG
GTGGAATCAAGATACGAAACCACAAGACAAGTTAGACAATGAAATTCATGCGAAATTGATTATTATTGATGAGATGTCTA
TGGTGGACACTTGGCTATTCCATCAATTTATGGATGCAGTGCCTATCGATGCACAAGTCGTATTAGTTGGTGATGAAGAC
CAGCTCCCATCAGTTGGCCCCGGACAAGTTTTTAAAGATCTCATTGACGCGAATGTATTACCGCGCATTAATTTAACTGA
AGTTTATCGCCAACAGGACGGCTCCAGTATTATTGATTTAGCGCATCGCATGAAACTCGGTGAAAAAGTCGATATTACCC
AACGTTTTCACGATCGTTCGTTTATTCCATGTCAAACCGATCAAATTCCACAAGTTGTAGAAAAAGTGGTCAACAATGCT
GTGCAAAAAGGCTATACGATGGCAGATATTCAAGTGCTCGCACCGATGTATCGTGGGAATGCAGGGATTAAAAAGCTTAA
CCAAATTTTACAAGACATTTTGAATCCATTGTCAGACGAATCGCAACGTGAGATTGAATTTGGTGATGTCCTATTTCGTA
AAGGCGACAAAGTATTGCAACTGATTAATCGTCCGAACGACAATGTGTTTAATGGCGATATTGGTGTCATTGTCGGAATT
TTTTGGGCAAAGGAAAATGCTTTAAATAAAGATGTCGTGGTCGTCGATTATGATGGGAATGAAATTACTTATTTACGCTC
TGATTTGACGGAATTGACCCATGCCTATTGTACTTCGATTCATAAAGCACAAGGTTCAGAGTTTCCGATCGTTATTATGC
CCATTGTTAAGCAATATTTTAGAATGTTGCAAAAGCCGATTTTATATACTGGATTAACGCGTGCCAAACAATCGCTCGTT
TTTCTAGGTGATGCGGATGCTTTTAATATCGGGTTAGCGACTGCAGGTCAAACGCGGTTAACGCAATTACAAACGTTCTT
AACGCAATATTTTAATCCGGAAGATAGTGAGGATGAAGTAGATACTGATACGGATTCTGCTGCGTTTATTTTAACTGAAG
CGACTATGTTTAAAATTCACCCGATGATTAATATGGGTGAAGTCACACCGTATGACTTTTTAGAAATTGACAAAGTTTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (674-721)

• AAA domain (AAA_30) (339-546)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.812	99.75	0.497