Detailed information NTG1118299

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ELZ51_RS09860
• Genome accession: NZ_LR134094
• Coordinates: 1945438..1946370 (-)
• Length: 310 a.a.
• NCBI ID: WP_126427332.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1940438..1951370

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELZ51_RS09835 (NCTC4669_02078)	tsaD	1940927..1941943 (-)	1017	WP_115245669.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
ELZ51_RS09840 (NCTC4669_02079)	rimI	1941933..1942358 (-)	426	WP_115245668.1	ribosomal protein S18-alanine N-acetyltransferase	-
ELZ51_RS09845 (NCTC4669_02080)	tsaB	1942360..1943058 (-)	699	WP_126427328.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
ELZ51_RS09850 (NCTC4669_02081)	-	1943344..1943574 (+)	231	WP_003052784.1	DNA-dependent RNA polymerase subunit epsilon	-
ELZ51_RS09855 (NCTC4669_02082)	rnjA	1943576..1945258 (+)	1683	WP_126427330.1	ribonuclease J1	-
ELZ51_RS09860 (NCTC4669_02083)	amiF	1945438..1946370 (-)	933	WP_126427332.1	ABC transporter ATP-binding protein	Regulator
ELZ51_RS09865 (NCTC4669_02084)	oppD	1946363..1947415 (-)	1053	WP_126427334.1	ABC transporter ATP-binding protein	Regulator
ELZ51_RS09870 (NCTC4669_02085)	-	1947427..1948458 (-)	1032	WP_126427336.1	ABC transporter permease	-
ELZ51_RS09875 (NCTC4669_02086)	-	1948468..1949382 (-)	915	WP_003052794.1	ABC transporter permease	-
ELZ51_RS09880 (NCTC4669_02087)	-	1949650..1951305 (-)	1656	WP_126427338.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35248.11 Da
• Isoelectric Point: 6.6705

>NTDB_id=1118299 ELZ51_RS09860 WP_126427332.1 1945438..1946370(-) (amiF) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQYKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYR

Nucleotide

• Length: 933 bp

>NTDB_id=1118299 ELZ51_RS09860 WP_126427332.1 1945438..1946370(-) (amiF) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCTGGATCAGGAAAAACAA
CTGTTGGTCGTGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTAACAGCTTCAAAAGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAATAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCTCGTGCTTTGGCAGTGAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTTGATGTGTC
GATTCAGGCCCAGGTGGTTAACTTGATGCAAAAGCTTCAGTACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTGCTCTCGGCTATTCCTGAGCCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTGTATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACTCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCGTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526