Detailed information NTG0111607

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: JL26_RS04010
• Genome accession: NZ_CP009158
• Coordinates: 763240..766068 (+)
• Length: 942 a.a.
• NCBI ID: WP_038513981.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain SH03
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 758240..771068

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JL26_RS03980 (JL26_04145)	-	758742..759020 (+)	279	WP_010786777.1	type II toxin-antitoxin system RelE/ParE family toxin	-
JL26_RS03985 (JL26_04150)	-	759031..759303 (+)	273	WP_005712616.1	HigA family addiction module antitoxin	-
JL26_RS03990 (JL26_04155)	rhlB	759367..760587 (+)	1221	WP_038513975.1	ATP-dependent RNA helicase RhlB	-
JL26_RS03995 (JL26_04160)	-	760597..760905 (+)	309	Protein_816	helicase HerA-like domain-containing protein	-
JL26_RS04000 (JL26_04165)	-	760977..762191 (-)	1215	WP_080716934.1	ATP-binding protein	-
JL26_RS04005 (JL26_04175)	ssb	762396..762938 (-)	543	WP_021115958.1	single-stranded DNA-binding protein	Machinery gene
JL26_RS04010 (JL26_04180)	uvrA	763240..766068 (+)	2829	WP_038513981.1	excinuclease ABC subunit UvrA	Machinery gene
JL26_RS04015 (JL26_04185)	-	766152..766532 (+)	381	WP_010786782.1	YacL family protein	-
JL26_RS04020 (JL26_04190)	-	766498..766749 (+)	252	WP_035491778.1	hypothetical protein	-

Sequence

Protein

• Length: 942 a.a.
• Molecular weight: 104499.01 Da
• Isoelectric Point: 6.6453

>NTDB_id=111607 JL26_RS04010 WP_038513981.1 763240..766068(+) (uvrA) [Glaesserella parasuis strain SH03]
MQHIDIRGARTHNLKNVNLVLPRDKFIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRCPDHDVPLAAQTISQMVDRVLEEPEGKRLMLLSPVVKDRKG
EHAKLLENLTANGYIRARIDGEICDLSDPPKLELQKKHTIEVVIDRFKVRSDIATRLAESFETALELSGSTAIIADMDDP
NAEELVFSSSFACSHCGYSLTELEPRLFSFNNPAGACPTCDGLGVQQYFDERKVVQNPDMSLASGAIKGWDRRSFYYFGL
LKSVAKHYDFDIEMPFNQLPKKIQNIILNGSKDEIEFVYVNDRGDSVKRVHTFEGVLNNMARRYKETESNAVREELAKYI
NNRTCTDCEGSRLRREARYVFLEKTNLPMVSEKSIGEALEFFEGLHLSGQKAQIAEKILKEIRERLSFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAIMAADHIVDIG
PGAGVHGGQIIAQGTAQEIMQNEASITGKFLSGKEKIEIPKQRTPRDESKQLVLKGASGNNLKEVDLAIPVGLFTCITGV
SGSGKSTLINDTLFPIAQNALNRAENSDVAPYKSIDGLAYFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RARGYTVGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFFD
AVPMIARKLQTLIDVGLSYIRLGQSSTTLSGGEAQRVKLAAELSKRDTGKTLYILDEPTTGLHFADIKQLLTVLHRLRDQ
GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIAEGTPEEVAKDKKSHTARFLKEILKKG

Nucleotide

• Length: 2829 bp

>NTDB_id=111607 JL26_RS04010 WP_038513981.1 763240..766068(+) (uvrA) [Glaesserella parasuis strain SH03]
ATGCAACATATTGATATTCGTGGGGCGAGAACCCACAATTTAAAAAACGTGAATTTGGTTCTTCCGAGAGATAAGTTTAT
TGTGATTACGGGGTTGTCAGGATCGGGCAAATCGTCTTTGGCTTTTGATACCCTTTATGCTGAAGGGCAACGTCGTTATG
TGGAAAGTTTATCCGCTTATGCTCGCCAGTTCTTGTCTTTGATGGAAAAGCCTGATGTCGATCATATTGAAGGACTTTCC
CCTGCGATTTCAATTGAGCAGAAATCTACCTCGCACAATCCTCGTTCTACGGTGGGAACGGTGACGGAAATCCACGATTA
TTTGCGTTTGTTGTTTGCTCGTGTGGGAGAGCCTCGCTGTCCTGATCACGATGTGCCGTTAGCGGCTCAGACGATTTCGC
AAATGGTGGATAGAGTGCTGGAAGAACCTGAAGGTAAGCGTTTGATGTTGCTTTCCCCTGTAGTGAAAGATCGTAAAGGT
GAACACGCAAAATTATTAGAAAATCTGACCGCTAATGGTTATATCCGTGCCAGAATTGATGGGGAAATTTGTGATCTGTC
CGATCCGCCCAAATTAGAGTTGCAGAAAAAACATACGATTGAAGTGGTGATTGATCGTTTTAAAGTGCGTAGCGATATTG
CGACCCGTTTAGCTGAGTCCTTTGAAACGGCATTGGAACTCTCAGGTTCAACAGCGATTATTGCCGATATGGACGATCCA
AATGCAGAAGAGTTAGTGTTTTCGTCGAGTTTTGCTTGCTCTCACTGTGGCTATTCGCTGACGGAATTAGAGCCACGTCT
TTTCTCGTTTAATAATCCTGCTGGGGCTTGCCCAACTTGTGATGGTTTGGGAGTTCAGCAATATTTTGATGAACGTAAAG
TGGTGCAAAATCCTGATATGTCCTTAGCAAGCGGTGCGATTAAGGGCTGGGATCGCCGTAGTTTCTACTATTTCGGTTTG
TTGAAATCAGTGGCGAAACATTATGATTTTGATATTGAAATGCCGTTTAATCAGTTACCGAAGAAAATTCAAAATATCAT
TTTAAATGGTTCAAAAGATGAAATTGAATTTGTCTATGTGAATGATCGGGGTGATAGCGTTAAGCGAGTTCACACTTTTG
AAGGGGTGCTGAATAATATGGCTCGTCGGTATAAGGAAACCGAGTCAAATGCAGTGCGTGAAGAGCTGGCTAAATATATT
AATAATCGTACTTGTACCGATTGTGAAGGCTCTCGTTTACGTCGTGAAGCCCGTTATGTCTTTTTAGAGAAAACCAACTT
GCCTATGGTGTCGGAAAAAAGTATCGGCGAAGCCTTAGAATTTTTTGAAGGCTTACATCTATCTGGGCAGAAAGCACAAA
TTGCGGAAAAAATTCTCAAAGAGATCCGTGAGCGTTTGTCTTTCCTTGTCAATGTTGGGTTGAACTACCTTTCGCTCTCT
CGTTCGGCAGAAACCTTATCAGGTGGTGAAGCCCAACGTATTCGCCTTGCCAGCCAAATTGGTGCTGGATTAGTGGGAGT
GATGTATGTGCTTGATGAGCCGTCTATTGGCTTGCACCAGAGAGATAACGAACGTTTGTTGAACACTCTTATTCATCTTC
GGAATTTGGGTAATACCGTGATTGTGGTTGAACACGATGAAGATGCGATTATGGCGGCGGATCATATTGTCGATATTGGA
CCAGGGGCAGGGGTACACGGTGGGCAGATTATTGCTCAGGGTACGGCTCAAGAAATTATGCAAAATGAAGCATCAATTAC
GGGCAAATTCTTATCGGGTAAGGAAAAAATCGAGATCCCGAAACAGCGTACCCCACGAGATGAAAGCAAACAGCTGGTGT
TAAAAGGGGCGAGCGGTAATAACTTGAAAGAAGTCGATTTAGCCATTCCTGTCGGTCTGTTTACTTGTATTACGGGGGTA
TCGGGTTCGGGCAAATCCACCTTAATTAACGATACCTTATTCCCGATTGCTCAAAATGCGTTAAACCGTGCAGAAAACAG
CGATGTCGCCCCTTATAAGAGCATTGACGGATTGGCTTATTTCGACAAAGTGATCGACATCAATCAAAGCCCGATTGGAC
GTACGCCACGTTCAAACCCTGCGACTTATACAGGTTTATTTACCCCGATTCGTGAACTCTTTGCTGGTACACAAGAAGCA
AGAGCAAGGGGCTATACTGTCGGACGTTTCAGCTTTAACGTGCGTGGCGGACGTTGTGAAGCCTGCCAAGGTGACGGGGT
GATCAAAGTTGAAATGCACTTCTTACCTGATGTATATGTGCCGTGCGACCACTGTAAAGGCAAACGCTATAACCGTGAAA
CCCTTGAAATTCGCTATAAAGGCAAAACCATTCATCAAGTGTTAGATATGACTGTGGAAGAAGCTCGTGAGTTTTTTGAT
GCCGTGCCGATGATTGCACGTAAGCTACAAACTTTAATAGACGTAGGCTTATCCTATATCCGTTTAGGGCAATCTTCTAC
CACCCTGTCAGGTGGCGAAGCTCAGCGGGTGAAACTGGCAGCGGAATTATCCAAACGTGACACGGGCAAAACCCTCTATA
TTCTTGATGAACCAACGACAGGATTACACTTCGCCGACATTAAACAATTATTGACCGTATTGCACCGCTTGCGTGATCAA
GGAAATACCATTGTGGTGATCGAGCATAACTTAGATGTGATCAAAACGGCAGACTGGATTGTCGATCTAGGTCCTGAAGG
CGGTAGCGGCGGCGGACAGATTATCGCCGAAGGTACGCCTGAAGAGGTGGCAAAAGATAAGAAATCCCATACGGCAAGAT
TTTTAAAAGAGATTTTGAAGAAAGGTTAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	56.976	99.682	0.568
uvrA	Streptococcus pneumoniae TIGR4	56.976	99.682	0.568
uvrA	Streptococcus pneumoniae D39	56.976	99.682	0.568