Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   AT689_RS11550 Genome accession   NZ_LN831051
Coordinates   820071..820880 (+) Length   269 a.a.
NCBI ID   WP_000601686.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain NCTC7465     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 815071..825880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT689_RS04360 (ERS445053_00849) - 815425..816033 (+) 609 WP_000083614.1 hypothetical protein -
  AT689_RS04365 (ERS445053_00850) - 816026..816436 (+) 411 WP_000595758.1 hypothetical protein -
  AT689_RS04370 (ERS445053_00851) ply 816447..817862 (+) 1416 WP_001284361.1 cholesterol-dependent cytolysin pneumolysin -
  AT689_RS04375 (ERS445053_00853) - 818743..819459 (+) 717 Protein_829 YebC/PmpR family DNA-binding transcriptional regulator -
  AT689_RS13400 - 819583..820054 (+) 472 Protein_830 MarR family winged helix-turn-helix transcriptional regulator -
  AT689_RS11550 (ERS445053_00856) rcrP 820071..820880 (+) 810 WP_000601686.1 ABC transporter permease Regulator
  AT689_RS04390 (ERS445053_00857) rcrQ 820935..821918 (+) 984 WP_223200646.1 ABC transporter ATP-binding protein Regulator
  AT689_RS04395 (ERS445053_00858) - 821984..822346 (+) 363 WP_000078805.1 DUF2200 domain-containing protein -
  AT689_RS04400 (ERS445053_00859) - 822343..822846 (+) 504 WP_000800942.1 phosphatase PAP2 family protein -
  AT689_RS04405 (ERS445053_00860) - 822960..823406 (+) 447 WP_000776589.1 LytTR family DNA-binding domain-containing protein -
  AT689_RS04410 (ERS445053_00861) - 823412..824086 (+) 675 WP_000725748.1 hypothetical protein -
  AT689_RS04415 - 824247..824438 (+) 192 WP_001843938.1 cell wall-binding repeat protein -
  AT689_RS13080 - 824463..824525 (+) 63 WP_219300018.1 hypothetical protein -
  AT689_RS04420 (ERS445053_00862) - 824723..825022 (+) 300 WP_001013974.1 DUF4651 domain-containing protein -
  AT689_RS04425 (ERS445053_00863) - 825019..825336 (+) 318 WP_000615767.1 thioredoxin family protein -

Sequence


Protein


Download         Length: 269 a.a.        Molecular weight: 30063.59 Da        Isoelectric Point: 7.9480

>NTDB_id=1114417 AT689_RS11550 WP_000601686.1 820071..820880(+) (rcrP) [Streptococcus pneumoniae strain NCTC7465]
MILLAILFTCFSVYLELEVPTYISKITDLLGSQGTNLDELWQPASMMMGMPFLAFLSVVAVGFFASRVAASYISRLRSDI
FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGPIMAIWAIGKILGHSEYWLWAVLVAVIVNVLMTTV
LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV
AIYWIGAYVINDAAPIARLPLFSFMSYAM

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1114417 AT689_RS11550 WP_000601686.1 820071..820880(+) (rcrP) [Streptococcus pneumoniae strain NCTC7465]
ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC
GGATTTGCTAGGTAGTCAAGGAACTAATTTAGATGAGTTGTGGCAGCCGGCAAGCATGATGATGGGAATGCCCTTTCTTG
CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATATTAGTAGGCTGAGAAGTGATATT
TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA
CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTCCAATTATGGCTATCTGGGCTATTG
GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGCAGTGATTGTCAACGTCCTGATGACGACCGTT
TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGCTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT
AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA
CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTG
GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTTTCATGTCTTA
TGCCATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

56.491

100

0.599


Multiple sequence alignment