Detailed information NTG1111287

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACNR9V_RS05605
• Genome accession: NZ_CP184786
• Coordinates: 1068053..1070407 (+)
• Length: 784 a.a.
• NCBI ID: WP_420768868.1
• Uniprot ID: -
• Organism: Parageobacillus thermoglucosidasius strain W-36
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1063053..1075407

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNR9V_RS05580 (ACNR9V_05580)	-	1063842..1064498 (+)	657	WP_013400329.1	YczE/YyaS/YitT family protein	-
ACNR9V_RS05585 (ACNR9V_05585)	cymR	1064509..1064925 (+)	417	WP_003248949.1	cysteine metabolism transcriptional regulator CymR	-
ACNR9V_RS05590 (ACNR9V_05590)	-	1064946..1066091 (+)	1146	WP_013876550.1	cysteine desulfurase family protein	-
ACNR9V_RS05595 (ACNR9V_05595)	mnmA	1066108..1067223 (+)	1116	WP_256832944.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACNR9V_RS05600 (ACNR9V_05600)	-	1067373..1068035 (+)	663	WP_042383474.1	tetratricopeptide repeat protein	-
ACNR9V_RS05605 (ACNR9V_05605)	recD2	1068053..1070407 (+)	2355	WP_420768868.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACNR9V_RS05610 (ACNR9V_05610)	-	1070443..1070913 (+)	471	WP_125009428.1	PRC-barrel domain-containing protein	-
ACNR9V_RS05615 (ACNR9V_05615)	-	1070929..1071117 (+)	189	WP_003248955.1	hypothetical protein	-
ACNR9V_RS05620 (ACNR9V_05620)	-	1071131..1071265 (+)	135	WP_256832939.1	YrzQ family protein	-
ACNR9V_RS05625 (ACNR9V_05625)	-	1071365..1072426 (+)	1062	WP_420768869.1	AI-2E family transporter	-
ACNR9V_RS05630 (ACNR9V_05630)	alaS	1072754..1075387 (+)	2634	WP_003248958.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 784 a.a.
• Molecular weight: 87935.51 Da
• Isoelectric Point: 5.0537

>NTDB_id=1111287 ACNR9V_RS05605 WP_420768868.1 1068053..1070407(+) (recD2) [Parageobacillus thermoglucosidasius strain W-36]
MQQLESFVFEGTSFIKGSYISTIFHNEANLYSVVRVRVEETNEAYDEQEVVVTGYFPKMNEHDTYIFYGKFHDHPKFGRQ
YVVDHFRKQFPNTKDGIIHYLSSDLFKGIGKKTAKAIVEALGENAISKILADPSVLDDVPKLSKQRAKELYDTLRAHEGL
EQTMIALSQFGFGPQLSMKIYQVYQDETLSVIQQNPYQLVEDVEGIGFGRADELGYRLGISGSHPARIRAACLFVLERDC
LQEGHVYVTERQLVTNIKQLLEAKRKETVSEEAIEQMLLMLSEEGKLIKEDEKFYIPSLYFAEKGIVTNVKRLLQQTEAV
MTFPESEFLLALGRLEERLSVQYAPTQKEAIRQALSSPLFILTGGPGTGKTTVIKGIVEIFADLHGFSLDPKDYTKDDPF
PILLAAPTGRAAKRMSEATGLPAVTIHRLLGWNGAEGFTHDEDEPISGKLLIVDEMSMVDTWLANQLFKSIPDGMQVILV
GDEDQLPSVGPGQVLKDLLQAGVIPTVRLTEVYRQAEGSSIIELAHQMKNGGLPPDLTAPKADRSFIRCQTSQVAEVVRQ
IADNARRKGFAVKDIQVLAPMYRGPAGIDRLNQVLQDLFNPKSEKKRELSVGDVIYRVGDKVLQLVNQPDDNVFNGDIGE
IVAIFYAKENTEKQDLVVVSFDGIEVTYSRQDLSQITHAYCCSIHKSQGSEFPIVILPVVKSYYRMLKRNLLYTAVTRSK
QFLIICGEEEAFKLGVARSDDSSRQTTLTEKLRKILVPAVEGELPMEDANIGMENVSPYDFMDE

Nucleotide

• Length: 2355 bp

>NTDB_id=1111287 ACNR9V_RS05605 WP_420768868.1 1068053..1070407(+) (recD2) [Parageobacillus thermoglucosidasius strain W-36]
TTGCAGCAACTGGAATCATTTGTTTTCGAGGGAACTTCGTTTATAAAAGGTTCATATATTTCCACCATTTTTCATAATGA
AGCGAATTTGTATTCCGTCGTTCGCGTCCGGGTCGAAGAAACGAACGAAGCGTACGATGAACAAGAAGTTGTGGTGACCG
GATATTTTCCTAAAATGAACGAGCATGACACGTATATTTTTTACGGGAAATTTCATGACCATCCAAAGTTCGGCCGGCAA
TATGTTGTCGACCATTTCCGCAAACAATTCCCTAACACGAAAGACGGCATCATTCACTATTTATCCAGCGATTTATTTAA
AGGAATCGGGAAAAAAACGGCAAAAGCGATCGTCGAAGCGCTTGGCGAAAATGCCATTTCCAAAATTTTAGCGGATCCAA
GCGTGTTGGATGATGTTCCAAAATTGTCAAAGCAAAGGGCAAAAGAGCTGTATGATACGTTGCGTGCCCATGAAGGGCTG
GAACAGACGATGATCGCGCTTTCCCAGTTTGGTTTTGGCCCGCAATTGTCGATGAAAATTTATCAAGTATACCAAGATGA
AACACTCTCCGTTATTCAGCAAAACCCCTACCAGCTTGTCGAAGATGTCGAAGGAATCGGCTTTGGCCGCGCCGACGAAT
TAGGCTACCGGCTTGGCATTTCCGGCAGCCATCCTGCGCGCATTCGCGCGGCGTGTTTGTTTGTGTTAGAACGGGATTGC
CTTCAAGAAGGGCATGTGTATGTGACAGAAAGGCAGCTTGTCACAAACATTAAACAGCTTTTGGAAGCAAAACGAAAAGA
AACAGTCAGTGAAGAAGCGATCGAGCAAATGTTGTTAATGCTTTCTGAAGAAGGAAAGCTGATCAAGGAAGATGAAAAAT
TTTATATTCCGTCGCTTTATTTTGCTGAAAAAGGAATTGTGACAAATGTGAAGCGCCTTTTACAGCAAACGGAAGCAGTG
ATGACGTTTCCGGAATCGGAATTTTTGTTAGCGCTCGGAAGGCTTGAGGAGCGTTTATCCGTTCAATATGCTCCCACGCA
AAAAGAAGCGATTCGACAAGCGCTTTCTTCCCCGCTGTTTATTTTGACCGGAGGCCCCGGCACAGGAAAAACGACAGTCA
TTAAAGGGATTGTGGAAATTTTCGCTGATTTGCACGGTTTTTCCCTCGATCCGAAAGATTACACGAAAGATGATCCATTT
CCGATTTTGCTCGCCGCGCCGACGGGAAGGGCGGCAAAAAGAATGAGCGAAGCGACGGGTTTGCCTGCGGTGACGATTCA
CCGTTTGCTTGGATGGAATGGGGCGGAAGGTTTTACCCATGATGAGGACGAGCCGATTAGCGGCAAACTTTTAATCGTTG
ATGAAATGTCGATGGTCGATACGTGGCTGGCCAATCAGCTGTTTAAGTCGATTCCGGACGGCATGCAAGTGATCCTTGTC
GGGGATGAAGATCAGCTGCCATCTGTCGGACCGGGACAAGTGTTAAAGGATTTATTGCAAGCGGGTGTCATCCCGACCGT
TCGGCTAACCGAAGTGTACCGGCAAGCGGAGGGCTCATCGATTATCGAATTGGCGCACCAAATGAAAAACGGGGGCCTTC
CTCCGGACTTAACTGCTCCAAAGGCAGACCGCTCATTCATTCGCTGCCAGACTTCACAAGTTGCTGAAGTTGTCCGGCAA
ATTGCCGACAACGCGCGCAGAAAAGGCTTCGCAGTGAAAGACATTCAAGTGCTTGCCCCGATGTATCGCGGCCCTGCCGG
AATCGACCGCCTCAATCAAGTGCTGCAAGATTTGTTTAATCCGAAATCTGAGAAAAAGCGGGAACTTTCGGTTGGCGATG
TCATATATCGGGTTGGTGATAAGGTGCTGCAGCTTGTCAACCAACCTGATGACAATGTGTTTAATGGGGACATTGGGGAA
ATTGTCGCGATTTTTTACGCGAAAGAAAATACGGAGAAGCAAGATTTAGTTGTCGTTTCTTTTGACGGCATCGAGGTGAC
ATATTCGCGGCAAGATTTGTCGCAAATTACGCATGCATATTGCTGTTCCATTCATAAATCGCAAGGAAGCGAATTTCCAA
TTGTCATTTTGCCGGTTGTGAAAAGCTATTATCGCATGTTAAAGCGGAATTTATTATATACGGCCGTGACAAGGAGCAAA
CAATTTTTAATTATATGCGGCGAAGAAGAGGCGTTTAAATTAGGGGTTGCCCGCAGTGATGATAGCTCCCGGCAAACAAC
GCTGACGGAAAAATTGCGAAAAATTCTTGTCCCTGCTGTTGAAGGGGAGCTGCCGATGGAAGACGCGAACATCGGAATGG
AAAACGTTTCACCGTATGACTTTATGGACGAGTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-247)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (591-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (678-726)

• AAA domain (AAA_30) (343-551)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	63.43	100	0.642