Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | HQV12_RS07680 | Genome accession | NZ_CP184658 |
| Coordinates | 1601153..1601452 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain B0417 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1596153..1606452
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQV12_RS07655 (HQV12_07655) | gcvPA | 1597365..1598711 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| HQV12_RS07660 (HQV12_07660) | gcvT | 1598731..1599822 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| HQV12_RS07665 (HQV12_07665) | - | 1599981..1600505 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| HQV12_RS07670 (HQV12_07670) | - | 1600495..1600641 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| HQV12_RS07675 (HQV12_07675) | comGF | 1600738..1601235 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| HQV12_RS07680 (HQV12_07680) | comGE | 1601153..1601452 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| HQV12_RS07685 (HQV12_07685) | comGD | 1601439..1601885 (-) | 447 | WP_001791635.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| HQV12_RS07690 (HQV12_07690) | comGC | 1601863..1602174 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HQV12_RS07695 (HQV12_07695) | comGB | 1602188..1603258 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| HQV12_RS07700 (HQV12_07700) | comGA | 1603230..1604204 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HQV12_RS07705 (HQV12_07705) | - | 1604256..1604879 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| HQV12_RS07710 (HQV12_07710) | - | 1604876..1605205 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| HQV12_RS07715 (HQV12_07715) | - | 1605205..1606191 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| HQV12_RS07720 (HQV12_07720) | - | 1606188..1606391 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1110678 HQV12_RS07680 WP_000844413.1 1601153..1601452(-) (comGE) [Staphylococcus aureus strain B0417]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1110678 HQV12_RS07680 WP_000844413.1 1601153..1601452(-) (comGE) [Staphylococcus aureus strain B0417]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |