Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ACOCIA_RS01580 | Genome accession | NZ_CP184611 |
| Coordinates | 338485..339045 (+) | Length | 186 a.a. |
| NCBI ID | WP_085916952.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain CQPMC-AB11 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 333485..344045
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCIA_RS01555 (ACOCIA_01555) | - | 335626..335756 (-) | 131 | Protein_298 | hypothetical protein | - |
| ACOCIA_RS01560 (ACOCIA_01560) | rpoZ | 335795..336073 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ACOCIA_RS01565 (ACOCIA_01565) | gmk | 336146..336775 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| ACOCIA_RS01570 (ACOCIA_01570) | ispH | 336898..337848 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ACOCIA_RS01575 (ACOCIA_01575) | fimU | 338018..338491 (+) | 474 | WP_001214061.1 | pilus assembly FimT family protein | Machinery gene |
| ACOCIA_RS01580 (ACOCIA_01580) | pilV | 338485..339045 (+) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| ACOCIA_RS01585 (ACOCIA_01585) | pilW | 339046..340047 (+) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| ACOCIA_RS01590 (ACOCIA_01590) | pilX | 340044..340862 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 20190.13 Da Isoelectric Point: 8.2254
>NTDB_id=1110302 ACOCIA_RS01580 WP_085916952.1 338485..339045(+) (pilV) [Acinetobacter baumannii strain CQPMC-AB11]
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGRTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGRTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
Nucleotide
Download Length: 561 bp
>NTDB_id=1110302 ACOCIA_RS01580 WP_085916952.1 338485..339045(+) (pilV) [Acinetobacter baumannii strain CQPMC-AB11]
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGCTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCATCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTCGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAGAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGCTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCATCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTCGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAGAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
99.462 |
100 |
0.995 |
| pilV | Acinetobacter baylyi ADP1 |
40.86 |
100 |
0.409 |