Detailed information NTG1110272

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACOCII_RS09950
• Genome accession: NZ_CP184609
• Coordinates: 2096413..2097114 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain CQPMC-AB12
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2091413..2102114

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOCII_RS09915 (ACOCII_09915)	kdsB	2091936..2092697 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACOCII_RS09920 (ACOCII_09920)	-	2092709..2093689 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACOCII_RS09925 (ACOCII_09925)	-	2093701..2094042 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACOCII_RS09930 (ACOCII_09930)	-	2094060..2094833 (+)	774	WP_000497298.1	TatD family hydrolase	-
ACOCII_RS09935 (ACOCII_09935)	-	2094871..2095479 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACOCII_RS09940 (ACOCII_09940)	-	2095489..2096043 (+)	555	WP_000841373.1	type II secretion system protein	-
ACOCII_RS09945 (ACOCII_09945)	xcpV	2096033..2096413 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACOCII_RS09950 (ACOCII_09950)	xcpW	2096413..2097114 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACOCII_RS09955 (ACOCII_09955)	gspK	2097114..2098073 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACOCII_RS09960 (ACOCII_09960)	-	2098304..2098900 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
ACOCII_RS09965 (ACOCII_09965)	ung	2098951..2099664 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACOCII_RS09970 (ACOCII_09970)	-	2099661..2100782 (+)	1122	Protein_1944	enoyl-CoA hydratase/isomerase family protein	-
ACOCII_RS09975 (ACOCII_09975)	tadA	2100792..2101295 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACOCII_RS09980 (ACOCII_09980)	-	2101365..2101808 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1110272 ACOCII_RS09950 WP_000594589.1 2096413..2097114(+) (xcpW) [Acinetobacter baumannii strain CQPMC-AB12]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1110272 ACOCII_RS09950 WP_000594589.1 2096413..2097114(+) (xcpW) [Acinetobacter baumannii strain CQPMC-AB12]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996