Detailed information NTG1110083

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACOCIH_RS09955
• Genome accession: NZ_CP184601
• Coordinates: 2096424..2097125 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain CQPMC-AB17
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2091424..2102125

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOCIH_RS09920 (ACOCIH_09920)	kdsB	2091947..2092708 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACOCIH_RS09925 (ACOCIH_09925)	-	2092720..2093700 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACOCIH_RS09930 (ACOCIH_09930)	-	2093712..2094053 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACOCIH_RS09935 (ACOCIH_09935)	-	2094071..2094844 (+)	774	WP_000497298.1	TatD family hydrolase	-
ACOCIH_RS09940 (ACOCIH_09940)	-	2094882..2095490 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACOCIH_RS09945 (ACOCIH_09945)	-	2095500..2096054 (+)	555	WP_000841373.1	type II secretion system protein	-
ACOCIH_RS09950 (ACOCIH_09950)	xcpV	2096044..2096424 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACOCIH_RS09955 (ACOCIH_09955)	xcpW	2096424..2097125 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACOCIH_RS09960 (ACOCIH_09960)	gspK	2097125..2098084 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACOCIH_RS09965 (ACOCIH_09965)	-	2098315..2098911 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
ACOCIH_RS09970 (ACOCIH_09970)	ung	2098962..2099675 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACOCIH_RS09975 (ACOCIH_09975)	-	2099672..2100796 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACOCIH_RS09980 (ACOCIH_09980)	tadA	2100803..2101306 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACOCIH_RS09985 (ACOCIH_09985)	-	2101376..2101819 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1110083 ACOCIH_RS09955 WP_000594589.1 2096424..2097125(+) (xcpW) [Acinetobacter baumannii strain CQPMC-AB17]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1110083 ACOCIH_RS09955 WP_000594589.1 2096424..2097125(+) (xcpW) [Acinetobacter baumannii strain CQPMC-AB17]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996