Detailed information NTG1109942

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACOCIB_RS09950
• Genome accession: NZ_CP184593
• Coordinates: 2096417..2097118 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain CQPMC-AB22
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2091417..2102118

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOCIB_RS09915 (ACOCIB_09915)	kdsB	2091940..2092701 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACOCIB_RS09920 (ACOCIB_09920)	-	2092713..2093693 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACOCIB_RS09925 (ACOCIB_09925)	-	2093705..2094046 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACOCIB_RS09930 (ACOCIB_09930)	-	2094064..2094837 (+)	774	WP_000497298.1	TatD family hydrolase	-
ACOCIB_RS09935 (ACOCIB_09935)	-	2094875..2095483 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACOCIB_RS09940 (ACOCIB_09940)	-	2095493..2096047 (+)	555	WP_000841373.1	type II secretion system protein	-
ACOCIB_RS09945 (ACOCIB_09945)	xcpV	2096037..2096417 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACOCIB_RS09950 (ACOCIB_09950)	xcpW	2096417..2097118 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACOCIB_RS09955 (ACOCIB_09955)	gspK	2097118..2098077 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACOCIB_RS09960 (ACOCIB_09960)	-	2098308..2098904 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
ACOCIB_RS09965 (ACOCIB_09965)	ung	2098955..2099668 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACOCIB_RS09970 (ACOCIB_09970)	-	2099665..2100789 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACOCIB_RS09975 (ACOCIB_09975)	tadA	2100796..2101299 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACOCIB_RS09980 (ACOCIB_09980)	-	2101369..2101812 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1109942 ACOCIB_RS09950 WP_000594589.1 2096417..2097118(+) (xcpW) [Acinetobacter baumannii strain CQPMC-AB22]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1109942 ACOCIB_RS09950 WP_000594589.1 2096417..2097118(+) (xcpW) [Acinetobacter baumannii strain CQPMC-AB22]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996