Detailed information NTG1109895

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACOCH7_RS09960
• Genome accession: NZ_CP184591
• Coordinates: 2096418..2097119 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain CQPMC-AB23
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2091418..2102119

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOCH7_RS09925 (ACOCH7_09925)	kdsB	2091941..2092702 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACOCH7_RS09930 (ACOCH7_09930)	-	2092714..2093694 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACOCH7_RS09935 (ACOCH7_09935)	-	2093706..2094047 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACOCH7_RS09940 (ACOCH7_09940)	-	2094065..2094838 (+)	774	WP_000497298.1	TatD family hydrolase	-
ACOCH7_RS09945 (ACOCH7_09945)	-	2094876..2095484 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACOCH7_RS09950 (ACOCH7_09950)	-	2095494..2096048 (+)	555	WP_000841373.1	type II secretion system protein	-
ACOCH7_RS09955 (ACOCH7_09955)	xcpV	2096038..2096418 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACOCH7_RS09960 (ACOCH7_09960)	xcpW	2096418..2097119 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACOCH7_RS09965 (ACOCH7_09965)	gspK	2097119..2098078 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACOCH7_RS09970 (ACOCH7_09970)	-	2098309..2098905 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
ACOCH7_RS09975 (ACOCH7_09975)	ung	2098956..2099669 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACOCH7_RS09980 (ACOCH7_09980)	-	2099666..2100790 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACOCH7_RS09985 (ACOCH7_09985)	tadA	2100797..2101300 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACOCH7_RS09990 (ACOCH7_09990)	-	2101370..2101813 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1109895 ACOCH7_RS09960 WP_000594589.1 2096418..2097119(+) (xcpW) [Acinetobacter baumannii strain CQPMC-AB23]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1109895 ACOCH7_RS09960 WP_000594589.1 2096418..2097119(+) (xcpW) [Acinetobacter baumannii strain CQPMC-AB23]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996