Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ACOCH7_RS01520 | Genome accession | NZ_CP184591 |
| Coordinates | 322325..322750 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain CQPMC-AB23 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 317325..327750
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCH7_RS01490 (ACOCH7_01490) | - | 317853..318887 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| ACOCH7_RS01495 (ACOCH7_01495) | - | 319002..319943 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| ACOCH7_RS01500 (ACOCH7_01500) | rplS | 319996..320364 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACOCH7_RS01505 (ACOCH7_01505) | trmD | 320573..321313 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACOCH7_RS01510 (ACOCH7_01510) | rimM | 321359..321907 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ACOCH7_RS01515 (ACOCH7_01515) | rpsP | 321927..322178 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACOCH7_RS01520 (ACOCH7_01520) | pilE | 322325..322750 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ACOCH7_RS01525 (ACOCH7_01525) | pilY2 | 322747..323229 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| ACOCH7_RS01530 (ACOCH7_01530) | pilY1 | 323242..327096 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=1109871 ACOCH7_RS01520 WP_000788342.1 322325..322750(-) (pilE) [Acinetobacter baumannii strain CQPMC-AB23]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1109871 ACOCH7_RS01520 WP_000788342.1 322325..322750(-) (pilE) [Acinetobacter baumannii strain CQPMC-AB23]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |