Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ACOCH9_RS01660 | Genome accession | NZ_CP184583 |
| Coordinates | 355587..356012 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain CQPMC-AB28 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 350587..361012
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCH9_RS01630 (ACOCH9_01630) | - | 351115..352149 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| ACOCH9_RS01635 (ACOCH9_01635) | - | 352264..353205 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| ACOCH9_RS01640 (ACOCH9_01640) | rplS | 353258..353626 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACOCH9_RS01645 (ACOCH9_01645) | trmD | 353835..354575 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACOCH9_RS01650 (ACOCH9_01650) | rimM | 354621..355169 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ACOCH9_RS01655 (ACOCH9_01655) | rpsP | 355189..355440 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACOCH9_RS01660 (ACOCH9_01660) | pilE | 355587..356012 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ACOCH9_RS01665 (ACOCH9_01665) | pilY2 | 356009..356491 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| ACOCH9_RS01670 (ACOCH9_01670) | pilY1 | 356504..360358 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=1109734 ACOCH9_RS01660 WP_000788342.1 355587..356012(-) (pilE) [Acinetobacter baumannii strain CQPMC-AB28]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1109734 ACOCH9_RS01660 WP_000788342.1 355587..356012(-) (pilE) [Acinetobacter baumannii strain CQPMC-AB28]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |