Detailed information NTG1106753

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACN6MU_RS08000
• Genome accession: NZ_CP183885
• Coordinates: 1573910..1576333 (-)
• Length: 807 a.a.
• NCBI ID: WP_350473254.1
• Uniprot ID: -
• Organism: Psychrobacillus psychrotolerans strain BC2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1568910..1581333

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN6MU_RS07980 (ACN6MU_07980)	-	1569840..1570142 (-)	303	WP_093537055.1	DUF1292 domain-containing protein	-
ACN6MU_RS07985 (ACN6MU_07985)	ruvX	1570154..1570573 (-)	420	WP_093537054.1	Holliday junction resolvase RuvX	-
ACN6MU_RS07990 (ACN6MU_07990)	-	1570576..1570842 (-)	267	WP_093537053.1	IreB family regulatory phosphoprotein	-
ACN6MU_RS07995 (ACN6MU_07995)	alaS	1570921..1573554 (-)	2634	WP_340830938.1	alanine--tRNA ligase	-
ACN6MU_RS08000 (ACN6MU_08000)	recD2	1573910..1576333 (-)	2424	WP_350473254.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACN6MU_RS08005 (ACN6MU_08005)	-	1576355..1577011 (-)	657	WP_419958640.1	tetratricopeptide repeat protein	-
ACN6MU_RS08010 (ACN6MU_08010)	mnmA	1577026..1578138 (-)	1113	WP_340762778.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACN6MU_RS08015 (ACN6MU_08015)	-	1578229..1579359 (-)	1131	WP_340762780.1	cysteine desulfurase family protein	-
ACN6MU_RS08020 (ACN6MU_08020)	cymR	1579370..1579792 (-)	423	WP_093537047.1	cysteine metabolism transcriptional regulator CymR	-
ACN6MU_RS08025 (ACN6MU_08025)	-	1579928..1581217 (+)	1290	WP_419958641.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 90558.08 Da
• Isoelectric Point: 5.4288

>NTDB_id=1106753 ACN6MU_RS08000 WP_350473254.1 1573910..1576333(-) (recD2) [Psychrobacillus psychrotolerans strain BC2]
MTNEINNEKQFITGRPIVSIFHNPQNLFSIIKLKIKSTNTTYTEKEVIVSGYFPPLVLEEPYKFIGYIKNHPKYGVQFQV
ETFQKEVPATEQGIIHYLSSDMFTGIGRKTAELIVKKLGTNAINKILEDPQALDVVPRLSEDKKVTLRAVLEQNLGLEKV
MIQLNEWGFGPQIAMKIYQAYREETLAVLTKNPFRLIEEVEGVGFVRADELGYKLGIKGNHPDRIKAAIYHLLQTASLGE
GHVFLYAEQLLESVKKLLENAQHEEIPYDAITKCCIELAEENRIVGEVNRFYIPSLYYSEVGIGSKIETLLAENDTHHQF
PLAEMKKHLGGIEERLGVQYAPTQINAIETALNASMTLLTGGPGTGKTTVVRGIVELYAELHGLSLDPKEWLKDKKPFPV
VLAAPTGRAAKRLSESTDLPAMTIHRLLGFTGQEDSDVEGKEIEGKLIIIDETSMLDTWLGHQLLKAIPKDAQVIFVGDQ
DQLPPVGPGQVLKDLLASNRIPTVELKDIYRQAEGSSIIELAHEMKQGTVPASLLDKTKDRSFIKASTEQIPKVVEQVLK
SALSKGLSIRDMQVLAPMYRGPAGIDALNKMIQEMVNPNTDGKRKEMIFGETIYRIGDKVLQLVNQPESHVFNGDMGEVI
SIFKAAETVEKKEMLIVSFDGNEVTYEKNDLNQLTLAYCCSVHKSQGSEFQTVIMPITRSYMKMLRRNLLYTGITRAKNF
LILCGDPEVFKFGVERTDDLQRLTTLKDRLTHTEEAEPAEEKELKSDTETRANQTDLTYLTAENYHVVDPLIGMNGVTPY
QFMDTDN

Nucleotide

• Length: 2424 bp

>NTDB_id=1106753 ACN6MU_RS08000 WP_350473254.1 1573910..1576333(-) (recD2) [Psychrobacillus psychrotolerans strain BC2]
ATGACCAACGAAATAAATAATGAAAAGCAATTTATTACGGGTCGTCCTATCGTTTCGATTTTTCATAACCCTCAAAACTT
ATTCTCTATCATCAAATTGAAAATAAAATCCACTAACACTACCTACACAGAAAAAGAAGTAATTGTATCTGGTTATTTCC
CTCCGTTAGTACTTGAAGAACCATACAAATTCATTGGTTATATTAAAAATCATCCGAAATATGGCGTGCAATTTCAAGTG
GAAACATTCCAAAAAGAAGTACCAGCGACAGAACAAGGAATTATTCATTATCTTTCCAGTGATATGTTCACAGGGATTGG
ACGCAAAACTGCTGAACTAATTGTGAAAAAGCTAGGCACAAATGCCATTAACAAAATATTAGAGGACCCACAGGCCTTAG
ATGTAGTGCCTCGCCTTTCAGAAGATAAAAAAGTGACGCTACGTGCAGTTCTGGAACAAAATTTAGGCTTGGAAAAAGTA
ATGATTCAACTCAATGAATGGGGATTTGGTCCTCAGATTGCTATGAAAATATATCAAGCGTATCGAGAAGAAACACTTGC
TGTGCTTACGAAGAATCCATTCCGTCTAATTGAAGAGGTAGAGGGAGTAGGTTTTGTTCGAGCAGATGAGCTTGGCTATA
AATTAGGGATAAAAGGAAACCATCCAGATCGTATTAAAGCAGCAATCTACCATTTGCTTCAAACAGCTTCCTTAGGGGAA
GGTCATGTATTTCTTTATGCAGAGCAATTATTGGAATCTGTTAAAAAACTACTAGAAAATGCTCAACATGAAGAAATTCC
TTATGATGCAATTACTAAATGTTGCATTGAACTTGCAGAAGAAAATCGGATTGTCGGAGAAGTGAATCGTTTTTATATTC
CGTCTTTATATTATTCAGAAGTTGGCATTGGTTCCAAAATTGAAACCCTACTAGCCGAAAATGATACACATCATCAGTTT
CCTTTAGCAGAGATGAAAAAGCATCTTGGAGGTATCGAAGAACGTCTAGGTGTCCAATATGCTCCAACACAGATCAATGC
GATTGAAACGGCATTAAATGCAAGTATGACCTTACTTACTGGAGGTCCTGGTACGGGTAAAACTACGGTAGTTCGAGGAA
TCGTTGAACTATATGCAGAACTACATGGACTGTCTCTGGATCCAAAAGAATGGTTGAAAGACAAGAAACCATTTCCGGTA
GTATTAGCCGCTCCTACGGGTAGAGCAGCCAAGCGTCTAAGTGAATCGACAGACTTGCCAGCCATGACTATTCACCGACT
ATTAGGCTTTACTGGTCAAGAGGATTCGGATGTGGAAGGAAAAGAAATCGAAGGCAAACTAATTATTATTGATGAAACTT
CTATGTTAGATACATGGTTAGGGCATCAGCTCTTAAAAGCAATTCCAAAAGATGCTCAAGTTATTTTTGTAGGAGACCAA
GATCAACTTCCGCCAGTAGGACCAGGTCAGGTATTAAAGGATTTACTTGCCTCCAATCGAATCCCTACTGTAGAGCTAAA
GGATATTTATCGCCAGGCTGAAGGATCATCGATTATAGAACTTGCTCATGAGATGAAACAAGGAACGGTTCCCGCATCCT
TATTAGACAAAACAAAGGATCGTTCGTTCATCAAGGCTTCTACAGAGCAAATCCCAAAAGTAGTAGAGCAAGTACTGAAA
AGTGCATTATCAAAAGGACTTTCCATTCGAGATATGCAAGTATTAGCTCCTATGTATAGAGGTCCTGCTGGTATTGACGC
GCTTAATAAAATGATTCAAGAAATGGTCAACCCAAATACGGATGGAAAACGAAAAGAAATGATTTTTGGGGAAACTATTT
ATCGTATTGGGGATAAGGTACTTCAACTCGTCAATCAACCAGAAAGCCATGTATTTAATGGCGATATGGGAGAAGTTATT
AGTATATTTAAAGCTGCAGAAACAGTCGAGAAAAAAGAGATGCTAATTGTGTCATTTGATGGTAATGAAGTAACCTATGA
AAAAAATGATTTAAATCAGCTGACACTTGCTTATTGTTGCTCCGTTCATAAGTCACAAGGTAGTGAATTTCAAACGGTTA
TTATGCCTATCACGAGAAGCTATATGAAAATGTTAAGACGAAATTTACTGTATACAGGAATTACGCGTGCTAAAAACTTC
CTTATTCTTTGTGGAGACCCAGAAGTATTTAAGTTTGGAGTAGAGCGAACGGATGATCTTCAGCGATTGACTACATTAAA
AGATCGTTTAACGCATACAGAAGAAGCAGAACCCGCAGAAGAGAAAGAGTTAAAAAGTGATACTGAAACTAGAGCGAATC
AAACAGATTTGACCTATTTAACTGCAGAGAATTATCATGTAGTTGACCCTCTAATAGGGATGAATGGTGTCACTCCGTAT
CAATTTATGGACACAGACAATTGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (340-547)

• Helix-hairpin-helix containing domain (HHH_RecD2) (156-244)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (677-724)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (588-659)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	54.819	99.009	0.543