Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   ACN6MV_RS26880 Genome accession   NZ_CP183882
Coordinates   5971554..5973311 (+) Length   585 a.a.
NCBI ID   WP_042130981.1    Uniprot ID   A0A1R0XNY9
Organism   Paenibacillus sp. B-A-8     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 5966554..5978311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN6MV_RS26850 (ACN6MV_26845) - 5966631..5967206 (+) 576 WP_419885240.1 class I SAM-dependent methyltransferase -
  ACN6MV_RS26855 (ACN6MV_26850) - 5967226..5967906 (+) 681 WP_042130977.1 response regulator transcription factor -
  ACN6MV_RS26860 (ACN6MV_26855) - 5967899..5968993 (+) 1095 WP_042130978.1 sensor histidine kinase -
  ACN6MV_RS26865 (ACN6MV_26860) - 5969156..5969827 (+) 672 WP_076120943.1 response regulator transcription factor -
  ACN6MV_RS26870 (ACN6MV_26865) - 5969824..5970903 (+) 1080 WP_042130980.1 sensor histidine kinase -
  ACN6MV_RS26875 (ACN6MV_26870) - 5970900..5971385 (+) 486 WP_419885241.1 GNAT family N-acetyltransferase -
  ACN6MV_RS26880 (ACN6MV_26875) rcrP 5971554..5973311 (+) 1758 WP_042130981.1 ABC transporter ATP-binding protein Regulator
  ACN6MV_RS26885 (ACN6MV_26880) rcrQ 5973311..5975071 (+) 1761 WP_042130982.1 ABC transporter ATP-binding protein Regulator
  ACN6MV_RS26890 (ACN6MV_26885) - 5975144..5975932 (-) 789 WP_419885242.1 TrmH family RNA methyltransferase -
  ACN6MV_RS26895 (ACN6MV_26890) - 5976266..5976949 (-) 684 WP_331281342.1 potassium channel family protein -
  ACN6MV_RS26900 (ACN6MV_26895) - 5977113..5977349 (+) 237 WP_042130985.1 small acid-soluble spore protein SspI -

Sequence


Protein


Download         Length: 585 a.a.        Molecular weight: 64452.97 Da        Isoelectric Point: 5.4252

>NTDB_id=1106679 ACN6MV_RS26880 WP_042130981.1 5971554..5973311(+) (rcrP) [Paenibacillus sp. B-A-8]
MLKLLKNLEPKEWFLFGISLMFIIAQVWLDLELPDYMSDITRLIQTPGSEMNEIIVAGGWMLICALGSLATSVVVAGIAA
RIAADLSARLRSNLFDKVQSFSMEEISNFSTASLITRSTNDITQVQMLIVIGLQLLVKAPILAVWALLKISGKSWQWTLS
TGVAVALLVIIVAICIVLVLPKFKKLQLLTDNLNRVSRENLNGLRVIRAYNAEQYQEKKFAVANNELTSTNLFANNVMTM
LMPSITLIMSGLSLSIYWIGAVLIQAAEGTAKMGLFSDMIVFSSYAMQVVMAFMMLIMIFILLPRAQVSAKRINEVLETV
PSLKNGSVTQFPVKREDEIEFRGVSFKYPDAEEYVLENISFTAKQGETIAFIGSTGCGKSTLVNLIPRFYDATEGEVLVN
GINVKEYDQQALRNKMGYVSQKAVLFGGTVSSNIAFGENGSGQVLSSDIVDAVYTSQSSEFVEKLEGNYDAHIAQGGSNL
SGGQKQRLSIARAIARRPEILIFDDSFSALDYKTDRKLRSELKKDAHDSTMLIVAQRIGTIKDADKIIVLEAGQIAGIGT
HDQLMQTCSVYQEIAYSQLTKEELA

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=1106679 ACN6MV_RS26880 WP_042130981.1 5971554..5973311(+) (rcrP) [Paenibacillus sp. B-A-8]
ATGTTGAAATTACTCAAGAATCTGGAACCCAAAGAATGGTTCTTATTCGGCATCAGCCTCATGTTCATTATCGCTCAAGT
TTGGCTGGATTTAGAACTGCCTGACTACATGAGTGATATTACCCGGCTGATCCAGACACCAGGAAGCGAAATGAATGAGA
TCATTGTGGCAGGAGGCTGGATGCTGATCTGTGCTCTTGGCAGTCTGGCGACCTCGGTGGTTGTAGCAGGCATTGCTGCG
AGAATAGCGGCCGACTTGTCTGCAAGATTGCGTTCCAATTTGTTTGATAAGGTGCAGTCCTTCTCCATGGAGGAAATCAG
CAACTTCTCAACAGCAAGTCTAATTACCCGTTCCACGAATGACATCACGCAAGTACAAATGCTGATTGTGATCGGCTTAC
AACTGCTTGTGAAAGCTCCAATCCTTGCAGTGTGGGCGTTACTCAAGATTTCCGGCAAAAGCTGGCAGTGGACCCTTTCT
ACAGGTGTCGCGGTCGCACTCCTCGTAATTATTGTCGCGATCTGTATCGTGCTTGTCCTGCCTAAATTTAAAAAGCTGCA
GTTGCTTACAGATAATCTGAATCGTGTGTCCAGAGAGAATCTTAACGGTCTTCGTGTCATCCGGGCTTACAATGCCGAAC
AATATCAGGAAAAGAAGTTCGCTGTAGCCAACAACGAGCTTACCAGTACCAATCTATTTGCCAACAATGTTATGACCATG
TTGATGCCAAGTATTACTTTGATTATGAGTGGGTTAAGCCTCTCCATCTATTGGATCGGTGCCGTGCTCATTCAAGCAGC
CGAGGGGACAGCCAAGATGGGCTTGTTCTCAGATATGATCGTATTCTCATCTTATGCCATGCAAGTAGTTATGGCCTTTA
TGATGTTGATTATGATCTTTATCTTACTGCCCCGCGCTCAAGTGTCGGCTAAGCGTATCAATGAAGTACTAGAAACAGTA
CCTAGCTTGAAGAATGGATCAGTAACTCAATTCCCTGTGAAGCGAGAAGATGAAATTGAATTCAGGGGGGTTAGCTTCAA
ATATCCAGATGCAGAGGAATATGTGTTGGAGAACATCAGCTTCACGGCAAAACAGGGAGAAACGATTGCTTTTATCGGAT
CAACAGGCTGCGGAAAAAGTACACTTGTTAATCTCATTCCCCGTTTCTATGATGCTACAGAAGGTGAAGTGCTGGTAAAT
GGCATCAATGTTAAAGAATACGACCAGCAAGCGCTACGGAATAAAATGGGCTACGTCTCCCAGAAGGCTGTTTTGTTTGG
AGGAACAGTGTCCTCCAATATTGCATTTGGTGAGAACGGCTCCGGTCAGGTCCTCAGTTCAGATATTGTAGATGCGGTGT
ACACTTCCCAATCCTCTGAATTTGTAGAAAAGCTAGAGGGGAACTATGATGCCCATATCGCCCAAGGCGGATCAAATCTC
TCTGGCGGGCAGAAACAACGGCTGTCGATTGCCAGGGCGATTGCACGACGTCCAGAAATATTAATCTTTGACGATTCTTT
CTCGGCGCTTGACTATAAGACCGACCGCAAATTACGCAGTGAGCTAAAAAAAGACGCGCATGACTCAACAATGCTGATCG
TAGCTCAGCGTATCGGTACAATCAAAGACGCCGATAAAATCATTGTTCTGGAAGCCGGACAAATCGCCGGTATCGGAACA
CATGACCAATTAATGCAAACCTGCAGCGTATATCAGGAAATTGCCTACTCACAGCTGACCAAGGAGGAGCTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1R0XNY9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

51.846

100

0.528


Multiple sequence alignment