Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACN6IZ_RS08460 Genome accession   NZ_CP183809
Coordinates   1710969..1712732 (+) Length   587 a.a.
NCBI ID   WP_419750758.1    Uniprot ID   -
Organism   Terrisporobacter petrolearius strain 6C8     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1705969..1717732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN6IZ_RS08445 - 1707314..1708372 (-) 1059 WP_419750753.1 HAMP domain-containing sensor histidine kinase -
  ACN6IZ_RS08450 - 1708362..1709039 (-) 678 WP_074916241.1 response regulator transcription factor -
  ACN6IZ_RS08455 rcrP 1709207..1710976 (+) 1770 WP_419750756.1 ABC transporter ATP-binding protein Regulator
  ACN6IZ_RS08460 rcrQ 1710969..1712732 (+) 1764 WP_419750758.1 ABC transporter ATP-binding protein Regulator
  ACN6IZ_RS08465 - 1712991..1714349 (+) 1359 WP_419750760.1 protein kinase domain-containing protein -
  ACN6IZ_RS08470 - 1714688..1715185 (+) 498 WP_419750762.1 GNAT family N-acetyltransferase -
  ACN6IZ_RS08475 - 1715286..1716518 (+) 1233 WP_419750764.1 VanW family protein -
  ACN6IZ_RS08480 - 1716633..1717175 (+) 543 WP_206923658.1 NADH peroxidase -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64886.14 Da        Isoelectric Point: 6.4252

>NTDB_id=1106242 ACN6IZ_RS08460 WP_419750758.1 1710969..1712732(+) (rcrQ) [Terrisporobacter petrolearius strain 6C8]
MLNKNKQKSKGSFGNLLAYMKKYSFALILAFIFAIGGSIITVISPDKLSEVTDLIIKGIVAGINMDKISSICLTLAGLYG
ISVVLSYLQGFIMATVTQKTTKELRSDISNKMNKLPLKYFDKTTVGDVLSRMTNDVDTIGQTLNQSIGTLVSAISLLLGS
LYMMTTTNITLTITAVLSTIIGFGLMMLIISKSQKYFEHQQRYLGEINGHIEEAYTGHSVMKVYNAGEETNEKFKILNDN
LKQSGWKSQFISGLMMPLMSFIGNFGYVTVCVVGAVLAFNNKISFGVIVAFMMYIRFFTQPLAQFAQAATSLQSTSAACK
RVFEFLQEEEMEDESNKNISLENVEGHVKFEHVKFGYDKDKLIIKDFSADIKSGQKVAIVGPTGAGKTTLVNLLMKFYDV
NSGTIKIDGVPIQSLSREKVHELFCMVLQDTWLFEGTIRENITYNKEDVSQSVIVSACKAVGVDHFIRTLPDGYDTVLDD
NTNLSAGQKQLITIARAMVKNAPLLILDEATSSVDTRTELLIQEAMDKLTVGKTSFVIAHRLSTIKNADVILVMKDGDII
ESGNHEELLSENGFYAELYNSQFEKAS

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=1106242 ACN6IZ_RS08460 WP_419750758.1 1710969..1712732(+) (rcrQ) [Terrisporobacter petrolearius strain 6C8]
ATGCTTAATAAAAATAAACAAAAGTCAAAGGGAAGCTTTGGCAACTTATTGGCATATATGAAAAAATATAGTTTTGCATT
AATTTTAGCTTTTATATTTGCCATAGGTGGATCAATAATAACAGTTATAAGTCCAGATAAATTAAGTGAAGTCACAGATT
TGATTATAAAAGGAATAGTAGCTGGAATTAACATGGACAAGATATCTAGTATATGTTTAACATTAGCAGGATTATATGGT
ATTAGTGTTGTGTTATCTTATTTGCAAGGTTTTATAATGGCAACAGTAACACAAAAAACTACTAAAGAGTTAAGAAGTGA
TATATCTAATAAAATGAATAAATTACCATTAAAGTATTTTGATAAAACTACTGTTGGCGATGTTCTAAGTCGTATGACTA
ATGATGTGGATACAATAGGTCAAACTTTAAATCAAAGTATTGGGACTTTAGTAAGCGCTATATCCTTATTGTTAGGTTCA
TTGTACATGATGACAACTACAAACATCACTTTAACAATTACAGCAGTATTATCTACAATAATTGGTTTTGGGTTAATGAT
GTTAATAATATCAAAATCTCAAAAATATTTCGAACATCAACAACGCTACCTTGGAGAAATAAATGGACATATAGAAGAAG
CCTATACTGGTCATAGTGTAATGAAAGTATATAACGCAGGGGAAGAAACAAATGAAAAGTTTAAAATATTAAATGATAAT
CTTAAACAAAGTGGATGGAAATCACAATTTATATCAGGTTTAATGATGCCTTTAATGTCGTTTATCGGTAACTTTGGATA
TGTAACGGTTTGTGTTGTAGGTGCAGTACTAGCCTTCAATAATAAAATAAGTTTTGGTGTAATAGTAGCATTTATGATGT
ATATTAGGTTTTTTACACAACCCCTTGCTCAATTTGCTCAAGCAGCCACTTCTCTACAGTCAACATCAGCTGCATGTAAA
AGAGTATTTGAGTTTTTACAAGAAGAAGAAATGGAAGATGAAAGTAATAAAAACATATCTTTAGAAAATGTAGAAGGTCA
TGTTAAATTTGAACATGTTAAATTTGGATATGATAAAGATAAATTAATAATAAAAGATTTCTCTGCTGATATTAAATCAG
GACAAAAAGTTGCAATAGTCGGACCAACAGGAGCAGGTAAAACTACTTTAGTAAACCTATTAATGAAGTTTTATGATGTA
AATAGCGGAACAATAAAAATAGATGGAGTACCAATACAAAGTCTAAGTAGAGAAAAGGTACATGAGTTATTTTGTATGGT
ACTTCAAGACACATGGCTATTTGAAGGAACAATTAGAGAAAATATAACTTACAATAAAGAGGATGTGTCACAATCAGTTA
TAGTATCTGCTTGTAAAGCAGTTGGAGTAGATCATTTTATAAGAACTTTACCTGATGGGTATGACACCGTATTAGATGAT
AATACTAATTTATCTGCTGGTCAAAAACAGTTAATTACTATAGCAAGAGCAATGGTGAAAAATGCACCTTTATTAATACT
AGATGAGGCAACTAGTTCTGTAGATACTCGTACAGAATTATTAATACAAGAGGCAATGGATAAATTAACAGTAGGAAAAA
CTTCATTTGTTATAGCTCATAGACTATCAACTATAAAAAATGCTGATGTAATTTTAGTTATGAAAGATGGAGATATTATA
GAAAGTGGAAATCATGAAGAACTTTTAAGTGAAAATGGATTCTATGCAGAGCTTTATAATAGTCAATTTGAAAAAGCAAG
TTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(27-302)

ABC transporter (ABC_tran)

(365-512)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

58.997

98.467

0.581

Multiple sequence alignment