Detailed information NTG1105954

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: V3C22_RS06875
• Genome accession: NZ_CP183775
• Coordinates: 1424803..1425684 (-)
• Length: 293 a.a.
• NCBI ID: WP_002264825.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain Xc
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1419803..1430684

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V3C22_RS06850 (V3C22_06850)	vicR	1420697..1421404 (-)	708	WP_002262930.1	response regulator YycF	Regulator
V3C22_RS06855 (V3C22_06855)	-	1421757..1422539 (+)	783	WP_002262931.1	amino acid ABC transporter ATP-binding protein	-
V3C22_RS06860 (V3C22_06860)	-	1422536..1423348 (+)	813	WP_002262932.1	transporter substrate-binding domain-containing protein	-
V3C22_RS06865 (V3C22_06865)	-	1423366..1424070 (+)	705	WP_002262933.1	amino acid ABC transporter permease	-
V3C22_RS06870 (V3C22_06870)	-	1424085..1424735 (+)	651	WP_002262934.1	amino acid ABC transporter permease	-
V3C22_RS06875 (V3C22_06875)	endA	1424803..1425684 (-)	882	WP_002264825.1	DNA/RNA non-specific endonuclease	Machinery gene
V3C22_RS06880 (V3C22_06880)	-	1425726..1425914 (-)	189	WP_002264826.1	DNA-directed RNA polymerase subunit beta	-
V3C22_RS06885 (V3C22_06885)	murA	1425917..1427188 (-)	1272	WP_002273074.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
V3C22_RS06890 (V3C22_06890)	-	1427254..1427487 (-)	234	WP_002285829.1	DUF1146 family protein	-
V3C22_RS06895 (V3C22_06895)	-	1427760..1428176 (-)	417	WP_002262939.1	F0F1 ATP synthase subunit epsilon	-
V3C22_RS06900 (V3C22_06900)	atpD	1428190..1429596 (-)	1407	WP_002262940.1	F0F1 ATP synthase subunit beta	-
V3C22_RS06905 (V3C22_06905)	-	1429622..1430500 (-)	879	WP_002262941.1	F0F1 ATP synthase subunit gamma	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 32157.75 Da
• Isoelectric Point: 9.5337

>NTDB_id=1105954 V3C22_RS06875 WP_002264825.1 1424803..1425684(-) (endA) [Streptococcus mutans strain Xc]
MTRKTNKSQRKQQKLCLSLLAALSVFVCTYIATSDHIADSNPIKQAAQLLTGKNKDILSNGSMSHQATPSQELANTVMTD
AVKNALGRQIEWSGAGSFIINHNKTDLNADVASQPYANNQTKIVQGQTVPTVANALLSKATRQYRNRQETGNGRTNWQPA
GWHQLYDLPGDYDHAVDRGHLLAYALVGGLKRFDASTSNPQNVATQAAWANEANSSNSRGQNYYETLIRKALDSHKRVRY
RVTLIYDDNNDILASGSHLEAKSSDGSLEFNVFIPNVQSGLTFDYATGQVKAN

Nucleotide

• Length: 882 bp

>NTDB_id=1105954 V3C22_RS06875 WP_002264825.1 1424803..1425684(-) (endA) [Streptococcus mutans strain Xc]
ATGACTAGAAAAACGAACAAGTCTCAGCGAAAACAGCAAAAATTATGCTTATCTCTCCTTGCTGCTTTGAGCGTATTTGT
TTGTACTTATATTGCAACCAGTGATCATATTGCTGATAGTAACCCTATAAAGCAGGCTGCCCAATTATTGACAGGTAAAA
ACAAGGATATACTTTCAAATGGTTCAATGAGCCATCAAGCGACTCCCAGTCAAGAATTAGCCAATACTGTTATGACGGAT
GCAGTAAAAAATGCCTTGGGTAGACAAATTGAATGGAGTGGTGCAGGTTCTTTCATTATTAATCATAATAAAACTGACCT
TAACGCTGATGTTGCTAGCCAACCGTATGCTAATAATCAGACCAAAATCGTTCAAGGACAGACAGTACCAACAGTAGCAA
ATGCTTTGTTAAGTAAGGCTACTCGTCAGTACCGAAACCGCCAAGAGACAGGAAATGGCAGGACAAATTGGCAGCCAGCA
GGCTGGCATCAGCTTTATGATTTGCCGGGTGACTATGATCACGCGGTTGATCGTGGACACTTATTGGCTTATGCTTTGGT
TGGTGGTTTGAAACGATTTGATGCTTCAACGAGTAATCCTCAAAATGTAGCAACACAAGCAGCTTGGGCTAATGAAGCCA
ATAGTTCAAACTCAAGGGGACAAAATTATTATGAAACACTGATTAGAAAAGCTTTGGATAGTCATAAGCGTGTTCGTTAT
CGTGTGACTCTTATCTATGATGACAACAATGATATCTTAGCCAGTGGCAGTCATCTAGAAGCCAAATCATCAGATGGCAG
TCTAGAGTTCAATGTCTTTATTCCTAATGTTCAAAGCGGTTTGACCTTTGATTATGCAACAGGACAAGTTAAGGCAAATT
AA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (103-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	64.103	79.863	0.512
endA	Streptococcus pneumoniae D39	64.103	79.863	0.512
endA	Streptococcus pneumoniae R6	64.103	79.863	0.512
endA	Streptococcus pneumoniae TIGR4	64.103	79.863	0.512