Detailed information NTG1105282

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACNSPE_RS04085
• Genome accession: NZ_CP183326
• Coordinates: 863355..865763 (+)
• Length: 802 a.a.
• NCBI ID: WP_419393663.1
• Uniprot ID: -
• Organism: Cytobacillus praedii strain MM2025
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 858355..870763

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNSPE_RS04060 (ACNSPE_04060)	-	858901..859581 (+)	681	WP_057764824.1	YczE/YyaS/YitT family protein	-
ACNSPE_RS04065 (ACNSPE_04065)	cymR	859581..860000 (+)	420	WP_057764826.1	cysteine metabolism transcriptional regulator CymR	-
ACNSPE_RS04070 (ACNSPE_04070)	-	860090..861232 (+)	1143	WP_057764828.1	cysteine desulfurase family protein	-
ACNSPE_RS04075 (ACNSPE_04075)	mnmA	861264..862379 (+)	1116	WP_419393661.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACNSPE_RS04080 (ACNSPE_04080)	-	862655..863317 (+)	663	WP_419393662.1	tetratricopeptide repeat protein	-
ACNSPE_RS04085 (ACNSPE_04085)	recD2	863355..865763 (+)	2409	WP_419393663.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACNSPE_RS04090 (ACNSPE_04090)	-	865921..866088 (+)	168	WP_165571530.1	hypothetical protein	-
ACNSPE_RS04095 (ACNSPE_04095)	-	866185..866658 (+)	474	WP_057764838.1	PRC-barrel domain-containing protein	-
ACNSPE_RS04100 (ACNSPE_04100)	-	866671..866862 (+)	192	WP_053477116.1	hypothetical protein	-
ACNSPE_RS04105 (ACNSPE_04105)	-	866897..867022 (+)	126	WP_419394364.1	YrzQ family protein	-
ACNSPE_RS04110 (ACNSPE_04110)	-	867111..868193 (+)	1083	WP_419393664.1	AI-2E family transporter	-

Sequence

Protein

• Length: 802 a.a.
• Molecular weight: 90527.46 Da
• Isoelectric Point: 5.0525

>NTDB_id=1105282 ACNSPE_RS04085 WP_419393663.1 863355..865763(+) (recD2) [Cytobacillus praedii strain MM2025]
MEKQDSLDLFAEQGKYIKGKHLVTIFHNEQNLYTVLRIRVEETNDQYEDKEAVVTGYFPKMHEQETYIFYGELKDHPKFG
VQFQANHFRKDIPQTKQGVANYLSSELFKGIGKKTAESIVETLGENAISKILNQPSLLDQIPKLAPEKAKTLYDTLMEHQ
GLEQAMIALNQYGFGPQLSMKIYQAYKEQTMEVIQNNPYKLVEDIEGIGFGRADELGFKLGISGSHPDRIRAACLYILET
ESMQAGHVYTEARVLLPSVKRLLEENKRDGIEFESISNEIVKLGEEGKIMIEDQRLYVPSLYFSEKGLVTNIKRVLKQTQ
YEDQFPESEFLLALGKLEERLKVHYAPTQKDAIQTALMSPMLILTGGPGTGKTTVIKGIVELYADLHGCSLDPKDYKKEE
PFPFILAAPTGRAAKRMTESTGLPALTIHRLLGWNGTEGFDRHEENPLEGKIIIVDETSMVDIWLANQLFKAIPENMQVI
LVGDEDQLPSVGPGQVLKDLLNSERIPTVKLTDIYRQAEGSSIIELAHEMKKGRLPANISAQQADRSFIKCNPGQIATAI
EKVVLNAKKKGYTAKDIQVLAPMYKGPAGIDRLNEIIQEIFNPNDGTRKELAFGDVKYRIGDKVLQLVNQPENHVFNGDM
GEIVSIFYSKENTEKQDMVVVSFDGAEATYTRQDLNQITHAYCCSVHKSQGSEFPIVILPVVKSYYRMLRRNLLYTAITR
SKQFLILCGEEEALKIGVERADEQSRLTSLTEKLKEALSEHSPVEKELDGASLTYEEDLMNTDPLIGMENITPYDFMEIE
NT

Nucleotide

• Length: 2409 bp

>NTDB_id=1105282 ACNSPE_RS04085 WP_419393663.1 863355..865763(+) (recD2) [Cytobacillus praedii strain MM2025]
ATGGAGAAACAGGACTCCTTAGACTTGTTTGCTGAACAAGGGAAATACATAAAGGGAAAGCATCTCGTTACCATCTTTCA
TAATGAGCAAAACCTATATACGGTTTTGCGTATTCGGGTAGAGGAAACGAATGATCAGTATGAGGATAAAGAGGCAGTGG
TAACTGGATATTTTCCGAAGATGCATGAACAGGAAACGTATATTTTTTATGGAGAATTGAAAGATCACCCGAAATTTGGA
GTCCAGTTTCAGGCCAATCATTTTCGCAAAGATATCCCTCAGACGAAACAAGGTGTAGCAAATTATTTATCAAGTGAGCT
GTTTAAAGGAATTGGAAAAAAGACGGCTGAAAGCATCGTTGAAACATTAGGGGAAAATGCGATTTCAAAAATTCTAAATC
AGCCATCACTGCTTGACCAAATTCCGAAACTTGCGCCGGAAAAAGCTAAAACCTTATATGACACGTTAATGGAGCATCAG
GGACTGGAACAGGCAATGATTGCATTAAACCAGTATGGGTTTGGTCCACAGCTATCAATGAAGATTTACCAGGCTTATAA
AGAGCAAACGATGGAAGTTATACAGAATAATCCGTATAAACTTGTTGAGGATATTGAAGGTATTGGATTTGGCAGAGCAG
ATGAACTAGGCTTTAAATTAGGGATTTCAGGAAGCCATCCAGATAGAATTAGAGCGGCATGTCTATACATACTTGAAACG
GAAAGCATGCAGGCCGGACATGTGTACACGGAGGCAAGAGTACTATTGCCTAGTGTAAAAAGACTTCTTGAAGAAAATAA
GCGTGACGGAATTGAGTTCGAAAGCATTTCTAATGAAATTGTTAAGCTTGGGGAAGAAGGGAAAATTATGATCGAAGATC
AGCGATTGTATGTACCTTCCCTTTATTTTTCGGAAAAAGGACTAGTAACCAATATTAAACGGGTATTAAAGCAAACACAA
TATGAAGATCAGTTTCCAGAGTCAGAATTTCTGCTAGCATTAGGAAAATTGGAAGAGCGATTGAAGGTACATTATGCACC
AACTCAAAAAGATGCCATCCAAACGGCCTTAATGTCGCCTATGCTCATATTAACAGGTGGTCCAGGTACGGGAAAGACAA
CAGTTATTAAAGGGATTGTTGAGTTATATGCGGACTTGCATGGCTGCTCATTAGACCCGAAGGATTATAAAAAGGAAGAG
CCTTTTCCATTTATCTTAGCAGCTCCGACTGGCCGGGCTGCCAAAAGGATGACTGAGTCAACAGGCTTGCCTGCCTTAAC
GATTCATAGACTTCTTGGCTGGAATGGGACAGAAGGATTTGATCGGCATGAAGAAAATCCATTAGAGGGTAAAATTATCA
TTGTTGATGAAACTTCGATGGTTGATATTTGGCTTGCTAATCAGCTTTTTAAAGCAATTCCGGAAAATATGCAAGTTATA
TTAGTTGGGGATGAGGACCAGCTGCCTTCGGTTGGTCCTGGGCAAGTGTTAAAGGACTTACTTAATTCAGAACGAATTCC
AACGGTTAAATTAACGGATATTTACAGACAGGCAGAAGGGTCATCGATTATTGAGCTTGCACATGAAATGAAAAAAGGAA
GGCTCCCAGCGAATATTTCTGCCCAGCAGGCAGACCGCTCCTTTATTAAATGCAATCCTGGACAAATAGCAACTGCGATC
GAAAAAGTAGTTTTAAATGCAAAGAAAAAGGGGTATACAGCAAAGGATATTCAAGTGCTGGCACCAATGTATAAGGGACC
TGCTGGAATTGACCGTTTAAATGAAATTATACAGGAAATTTTTAATCCAAATGACGGAACAAGAAAAGAATTAGCTTTCG
GGGACGTTAAATACCGAATTGGCGATAAAGTTCTTCAATTGGTGAATCAGCCAGAAAATCATGTTTTTAATGGGGATATG
GGTGAAATTGTTTCGATTTTTTATTCGAAAGAAAACACGGAGAAGCAAGATATGGTTGTCGTTTCTTTTGATGGTGCCGA
AGCAACCTATACACGTCAGGATTTAAATCAAATTACACACGCGTATTGCTGCTCTGTACATAAATCACAGGGAAGTGAAT
TTCCGATTGTTATTCTTCCCGTTGTTAAGAGCTATTATCGAATGCTGCGAAGAAACTTGCTTTATACTGCCATCACACGC
AGTAAACAATTTCTTATCCTATGCGGGGAAGAAGAAGCATTAAAGATAGGTGTTGAAAGAGCAGATGAGCAATCACGGCT
AACGAGTTTAACTGAAAAGCTTAAAGAAGCACTTTCGGAACATTCCCCTGTAGAAAAAGAGCTTGATGGAGCATCTTTAA
CATATGAAGAGGATTTAATGAATACAGACCCGTTAATTGGGATGGAAAATATAACGCCGTATGATTTTATGGAAATAGAA
AATACCTAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-663)

• AAA domain (AAA_30) (345-551)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	63.659	99.501	0.633