Detailed information NTG0110438

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACAK36_RS00760
• Genome accession: NZ_AP031585
• Coordinates: 152957..153658 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain JUNP543
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 147957..158658

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAK36_RS00725 (JUNP543_0143)	kdsB	148480..149241 (+)	762	WP_045544209.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACAK36_RS00730 (JUNP543_0144)	-	149253..150233 (+)	981	WP_045544208.1	DNA polymerase III subunit delta'	-
ACAK36_RS00735 (JUNP543_0145)	-	150245..150586 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACAK36_RS00740 (JUNP543_0146)	-	150604..151377 (+)	774	WP_000497298.1	TatD family hydrolase	-
ACAK36_RS00745 (JUNP543_0147)	-	151415..152023 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACAK36_RS00750 (JUNP543_0148)	-	152033..152587 (+)	555	WP_000841373.1	type II secretion system protein	-
ACAK36_RS00755 (JUNP543_0149)	xcpV	152577..152957 (+)	381	WP_045544207.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACAK36_RS00760 (JUNP543_0150)	xcpW	152957..153658 (+)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACAK36_RS00765 (JUNP543_0151)	gspK	153658..154617 (+)	960	WP_045544206.1	type II secretion system minor pseudopilin GspK	-
ACAK36_RS00770 (JUNP543_0152)	-	154847..155443 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
ACAK36_RS00775 (JUNP543_0153)	ung	155494..156207 (+)	714	WP_001177530.1	uracil-DNA glycosylase	-
ACAK36_RS00780 (JUNP543_0154)	-	156204..157328 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACAK36_RS00785 (JUNP543_0155)	tadA	157335..157838 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
ACAK36_RS00790 (JUNP543_0156)	-	157908..158351 (+)	444	WP_045544205.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=110438 ACAK36_RS00760 WP_000594572.1 152957..153658(+) (xcpW) [Acinetobacter baumannii strain JUNP543]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=110438 ACAK36_RS00760 WP_000594572.1 152957..153658(+) (xcpW) [Acinetobacter baumannii strain JUNP543]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991