Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ACAK34_RS01920 | Genome accession | NZ_AP031582 |
| Coordinates | 401880..402305 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain JUNP499 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 396880..407305
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAK34_RS01910 (JUNP499_0389) | pilY1 | 397534..401388 (+) | 3855 | WP_000768944.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ACAK34_RS01915 (JUNP499_0390) | pilY2 | 401401..401883 (+) | 483 | WP_001046421.1 | type IV pilin protein | Machinery gene |
| ACAK34_RS01920 (JUNP499_0391) | pilE | 401880..402305 (+) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| ACAK34_RS01925 (JUNP499_0392) | rpsP | 402452..402703 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACAK34_RS01930 (JUNP499_0393) | rimM | 402723..403271 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ACAK34_RS01935 (JUNP499_0394) | trmD | 403317..404057 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACAK34_RS01940 (JUNP499_0395) | rplS | 404265..404633 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACAK34_RS01945 (JUNP499_0396) | - | 404685..405626 (-) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| ACAK34_RS01950 (JUNP499_0397) | - | 405741..406775 (-) | 1035 | WP_001189446.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=110356 ACAK34_RS01920 WP_000788337.1 401880..402305(+) (pilE) [Acinetobacter baumannii strain JUNP499]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=110356 ACAK34_RS01920 WP_000788337.1 401880..402305(+) (pilE) [Acinetobacter baumannii strain JUNP499]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |