Detailed information NTG1102539

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACM641_RS07695
• Genome accession: NZ_CP182815
• Coordinates: 1505894..1508326 (+)
• Length: 810 a.a.
• NCBI ID: WP_418302426.1
• Uniprot ID: -
• Organism: Lysinibacillus fusiformis strain A15
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1500894..1513326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM641_RS07670	-	1501279..1501938 (+)	660	WP_025114366.1	tetratricopeptide repeat protein	-
ACM641_RS07675	-	1502133..1503575 (+)	1443	WP_418302424.1	DHA2 family efflux MFS transporter permease subunit	-
ACM641_RS07680	-	1503652..1504383 (-)	732	WP_418302425.1	GTP pyrophosphokinase	-
ACM641_RS07685	-	1504654..1504941 (-)	288	WP_025114363.1	hypothetical protein	-
ACM641_RS07690	hisA	1504925..1505704 (-)	780	WP_025114362.1	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	-
ACM641_RS07695	recD2	1505894..1508326 (+)	2433	WP_418302426.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACM641_RS07700	hpaB	1508454..1509887 (+)	1434	WP_418302427.1	4-hydroxyphenylacetate 3-monooxygenase, oxygenase component	-
ACM641_RS07705	corA	1510353..1511318 (+)	966	WP_025114359.1	magnesium/cobalt transporter CorA	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 90805.11 Da
• Isoelectric Point: 4.9302

>NTDB_id=1102539 ACM641_RS07695 WP_418302426.1 1505894..1508326(+) (recD2) [Lysinibacillus fusiformis strain A15]
MTDHLDLFELNKFFILGRPIVSIFHNTQNMYSIIRVKIQETNLQYEDKEIIVVGYFPPLQMDEQYRFTGILKQHPKYGAQ
FQIETFTKEVPATEQGIIHYLSSDLFVGIGKKTAETIVEKLGANALRLILEDPSALDAVPRLSSEKKEVIHRTIEQNLGL
ERVMIQLNEWGFGPQLGMKIYQTYRTEAIELLTENPYRLIEDVEGVGFFRADELGAKLGITGKHPDRVKAAILHILNTAA
LSDGHVYLDAEHVLPLVKEMLEQSQRQEIPFEDISKACIELREDGKISGEETRLYLPSLYFSEVGIASKILTLVERNNKA
EHFSKDEIRKAIGETEELLHVTYAETQANAIEQALNSAVMILTGGPGTGKTTVVRGVVEVYAKLHGLSLNPKEYAQKEEP
FPIILCAPTGRAAKRLAESTELPAMTIHRLLGFTGQEKEEETEREVTGKLIIVDEMSMVDTWLAHQLLKALHEDVQVVFV
GDQDQLPPVGPGQVLKDLLASKQLPTVELTDVYRQAEGSTIIELAHQIKKGTIPKDLTSKTTDRSFIKSSVDQVGNVVTQ
VVKSAVAKGQEIRNIQVLAPMYKGPAGIDNLNKMIQELINPNDTGTRKELVFGDVTYRIKDKVLQLVNQPESNVFNGDMG
EVISIIKAKETVEKQDLLIVSFDGIEVTYQRSDLNQLTLAYCCSIHKSQGSEFQTVIMPVVKGYSKMLRRNLLYTGITRA
KNFLILCGEPDVLADGLQRTDDLQRFTSLRARLNPMDVNEVIDEVEAVPVEHEGVQETAIEDQKLTAETAPYIHPMIGMD
DVSPYDFLEK

Nucleotide

• Length: 2433 bp

>NTDB_id=1102539 ACM641_RS07695 WP_418302426.1 1505894..1508326(+) (recD2) [Lysinibacillus fusiformis strain A15]
ATGACAGATCATCTCGATTTATTTGAACTCAATAAATTTTTTATTCTCGGACGTCCGATTGTCTCTATTTTTCATAACAC
ACAAAATATGTATTCCATTATACGAGTGAAAATTCAAGAGACAAACTTACAATATGAAGATAAAGAAATTATTGTTGTTG
GCTATTTTCCACCATTACAAATGGATGAGCAATACCGCTTTACAGGTATATTAAAACAGCATCCTAAATATGGTGCACAA
TTCCAAATCGAGACATTTACAAAAGAGGTACCCGCTACTGAACAAGGAATTATTCATTATTTATCCAGTGACTTATTTGT
GGGAATCGGGAAAAAAACAGCTGAAACCATTGTTGAAAAACTAGGTGCTAATGCACTACGTCTTATTTTAGAAGATCCGA
GTGCACTGGATGCTGTTCCACGTTTATCATCTGAAAAAAAAGAAGTAATCCATCGCACGATTGAGCAAAACCTTGGTTTA
GAACGGGTAATGATCCAGCTGAATGAATGGGGCTTTGGTCCACAGCTTGGAATGAAAATATATCAAACCTATCGAACAGA
AGCCATTGAATTACTAACAGAAAACCCATATCGCTTGATTGAAGATGTGGAAGGGGTAGGGTTCTTTCGAGCAGATGAGC
TTGGTGCAAAATTAGGAATTACCGGAAAACATCCTGACCGTGTTAAAGCAGCTATTTTACATATTTTAAATACAGCTGCA
TTATCTGACGGGCATGTCTACCTAGACGCGGAGCATGTTCTACCACTTGTAAAGGAAATGCTTGAACAAAGTCAACGTCA
GGAAATTCCGTTTGAAGACATCTCAAAAGCATGTATTGAGCTACGAGAAGATGGAAAAATTTCTGGAGAAGAAACAAGAT
TATATTTACCTTCTCTTTATTTTTCTGAGGTAGGAATTGCCTCCAAAATATTGACGCTTGTTGAACGAAATAACAAGGCT
GAACATTTTAGCAAAGATGAGATTCGTAAAGCGATTGGTGAAACTGAGGAACTACTCCATGTGACTTATGCTGAAACACA
AGCAAATGCCATTGAACAGGCATTAAATTCAGCCGTAATGATTTTGACAGGTGGACCTGGTACGGGTAAAACGACTGTTG
TACGTGGGGTTGTTGAAGTTTATGCGAAGCTTCATGGCTTATCATTAAATCCAAAAGAATATGCTCAAAAAGAGGAGCCC
TTTCCCATTATCCTTTGTGCACCCACTGGGCGAGCAGCTAAGCGCTTAGCTGAATCGACTGAACTACCAGCTATGACTAT
TCACCGTTTACTCGGCTTTACAGGTCAAGAAAAAGAAGAGGAGACTGAACGAGAGGTAACAGGGAAGCTTATTATTGTAG
ATGAAATGTCTATGGTGGATACGTGGCTTGCACATCAATTATTAAAAGCTTTACATGAGGATGTACAGGTTGTTTTTGTA
GGGGATCAGGACCAATTACCCCCTGTAGGACCTGGACAGGTGTTAAAGGATTTATTAGCATCCAAGCAGCTTCCGACGGT
TGAATTGACAGATGTTTACCGACAAGCAGAGGGGTCTACAATTATTGAACTAGCCCACCAAATAAAAAAAGGAACCATTC
CGAAAGATTTAACATCGAAAACTACTGATCGCTCGTTTATCAAATCTTCCGTCGATCAGGTTGGAAATGTTGTGACACAG
GTAGTAAAAAGTGCTGTTGCAAAGGGACAAGAAATACGTAATATTCAAGTGTTAGCTCCAATGTATAAAGGTCCTGCTGG
CATTGATAATTTAAATAAAATGATTCAAGAGCTTATTAATCCTAATGATACAGGGACAAGAAAGGAACTTGTCTTCGGGG
ACGTAACGTATCGAATAAAAGATAAAGTTCTACAGCTAGTCAATCAACCTGAAAGTAATGTTTTTAATGGTGATATGGGA
GAAGTCATTAGTATTATTAAGGCAAAGGAGACGGTAGAAAAACAAGATTTACTAATCGTATCCTTTGATGGCATCGAAGT
GACCTATCAACGAAGTGATCTCAATCAATTGACACTAGCTTATTGTTGCTCCATTCATAAATCTCAAGGTTCAGAGTTTC
AAACCGTCATTATGCCCGTTGTCAAAGGATATTCAAAAATGCTGCGTCGTAATCTTTTATACACCGGCATTACAAGAGCG
AAAAACTTTTTGATTTTATGTGGGGAACCGGATGTACTAGCAGATGGCTTGCAGCGTACTGATGATTTACAGCGTTTTAC
TTCTTTGCGCGCTCGATTAAATCCAATGGATGTCAACGAAGTAATTGATGAAGTCGAGGCAGTTCCAGTAGAACATGAAG
GTGTGCAAGAAACTGCTATCGAGGACCAAAAATTAACAGCAGAAACAGCTCCTTATATTCATCCAATGATTGGTATGGAC
GATGTCTCCCCCTATGATTTTTTGGAAAAGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (343-549)

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-247)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-727)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (591-661)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	52.27	100	0.526