Detailed information NTG0110131

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACAK28_RS09015
• Genome accession: NZ_AP031577
• Coordinates: 1896065..1896766 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain JUNP403
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1891065..1901766

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAK28_RS08980 (JUNP403_1802)	kdsB	1891588..1892349 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACAK28_RS08985 (JUNP403_1803)	-	1892361..1893341 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACAK28_RS08990 (JUNP403_1804)	-	1893353..1893694 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACAK28_RS08995 (JUNP403_1805)	-	1893712..1894485 (+)	774	WP_000497298.1	TatD family hydrolase	-
ACAK28_RS09000 (JUNP403_1806)	-	1894523..1895131 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACAK28_RS09005 (JUNP403_1807)	-	1895141..1895695 (+)	555	WP_000841373.1	type II secretion system protein	-
ACAK28_RS09010 (JUNP403_1808)	xcpV	1895685..1896065 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACAK28_RS09015 (JUNP403_1809)	xcpW	1896065..1896766 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACAK28_RS09020 (JUNP403_1810)	gspK	1896766..1897725 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACAK28_RS09025 (JUNP403_1811)	-	1897956..1898552 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ACAK28_RS09030 (JUNP403_1812)	ung	1898603..1899316 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACAK28_RS09035 (JUNP403_1813)	-	1899313..1900437 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACAK28_RS09040 (JUNP403_1814)	tadA	1900444..1900947 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACAK28_RS09045 (JUNP403_1815)	-	1901017..1901460 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=110131 ACAK28_RS09015 WP_000594589.1 1896065..1896766(+) (xcpW) [Acinetobacter baumannii strain JUNP403]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=110131 ACAK28_RS09015 WP_000594589.1 1896065..1896766(+) (xcpW) [Acinetobacter baumannii strain JUNP403]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996