Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ACAK28_RS01720 | Genome accession | NZ_AP031577 |
| Coordinates | 364653..365078 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain JUNP403 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 359653..370078
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAK28_RS01710 (JUNP403_0344) | pilY1 | 360307..364161 (+) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ACAK28_RS01715 (JUNP403_0345) | pilY2 | 364174..364656 (+) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| ACAK28_RS01720 (JUNP403_0346) | pilE | 364653..365078 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ACAK28_RS01725 (JUNP403_0347) | rpsP | 365225..365476 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACAK28_RS01730 (JUNP403_0348) | rimM | 365496..366044 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ACAK28_RS01735 (JUNP403_0349) | trmD | 366090..366830 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACAK28_RS01740 (JUNP403_0350) | rplS | 367039..367407 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACAK28_RS01745 (JUNP403_0351) | - | 367460..368401 (-) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| ACAK28_RS01750 (JUNP403_0352) | - | 368516..369550 (-) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=110119 ACAK28_RS01720 WP_000788342.1 364653..365078(+) (pilE) [Acinetobacter baumannii strain JUNP403]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=110119 ACAK28_RS01720 WP_000788342.1 364653..365078(+) (pilE) [Acinetobacter baumannii strain JUNP403]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |