Detailed information NTG0110081

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACAK35_RS10170
• Genome accession: NZ_AP031576
• Coordinates: 2148430..2149131 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii strain JUNP402
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2143430..2154131

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAK35_RS10140 (JUNP402_2022)	-	2143737..2144180 (-)	444	WP_001246675.1	SRPBCC family protein	-
ACAK35_RS10145 (JUNP402_2023)	tadA	2144250..2144753 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
ACAK35_RS10150 (JUNP402_2024)	-	2144760..2145884 (-)	1125	WP_003114973.1	enoyl-CoA hydratase/isomerase family protein	-
ACAK35_RS10155 (JUNP402_2025)	ung	2145881..2146594 (-)	714	WP_001177527.1	uracil-DNA glycosylase	-
ACAK35_RS10160 (JUNP402_2026)	-	2146645..2147241 (-)	597	WP_000908449.1	6-carboxytetrahydropterin synthase	-
ACAK35_RS10165 (JUNP402_2027)	gspK	2147471..2148430 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
ACAK35_RS10170 (JUNP402_2028)	xcpW	2148430..2149131 (-)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACAK35_RS10175 (JUNP402_2029)	xcpV	2149131..2149511 (-)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACAK35_RS10180 (JUNP402_2030)	-	2149501..2150055 (-)	555	WP_000841373.1	type II secretion system protein	-
ACAK35_RS10185 (JUNP402_2031)	-	2150065..2150673 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACAK35_RS10190 (JUNP402_2032)	-	2150711..2151484 (-)	774	WP_000497300.1	TatD family hydrolase	-
ACAK35_RS10195 (JUNP402_2033)	-	2151502..2151843 (-)	342	WP_001183027.1	PilZ domain-containing protein	-
ACAK35_RS10200 (JUNP402_2034)	-	2151855..2152835 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
ACAK35_RS10205 (JUNP402_2035)	kdsB	2152847..2153608 (-)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=110081 ACAK35_RS10170 WP_000594579.1 2148430..2149131(-) (xcpW) [Acinetobacter baumannii strain JUNP402]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=110081 ACAK35_RS10170 WP_000594579.1 2148430..2149131(-) (xcpW) [Acinetobacter baumannii strain JUNP402]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983